C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ganglioside induced differentiation associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104381 GDAP1 9606 + 8:74321130-74488872 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000220822 GDAP1-001 74350382-74366876 protein_coding
  ENST00000434412 GDAP1-002 74350418-74364604 protein_coding
  ENST00000520797 GDAP1-008 74321514-74364260 processed_transcript
  ENST00000521096 GDAP1-007 74321130-74364290 processed_transcript
  ENST00000522568 GDAP1-003 74350444-74364741 nonsense_mediated_decay
  ENST00000523640 GDAP1-006 74350434-74360248 processed_transcript
  ENST00000524195 GDAP1-005 74362951-74488872 processed_transcript
  ENST00000524366 GDAP1-004 74350444-74364029 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverLungOvaryPlacentaTestisENST00000220822ENST00000434412ENST00000521096
Transcript ID Adipose Bladder Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000220822 0.223±0.00 0.895±0.00 17.060±0.78 0.212±0.00 0.429±0.00 N/A 1.206±0.00 1.180±0.61 N/A 1.203±0.00
ENST00000434412 N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A
ENST00000521096 N/A N/A N/A N/A N/A N/A N/A 1.557±0.00 0.472±0.00 2.765±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OK CIL_0002OK_0001 CGP 8:73991352-74321328
CIL_00008Q CIL_00008Q_0002 CGP 8:74234700-74488872
CIL_00008K CIL_00008K_0002 CGP 8:74321130-74855029

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000266 IDA mitochondrial fission
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006626 IMP protein targeting to mitochondrion
GO:0008219 IEA cell death
GO:0016020 IDA membrane
GO:0031307 IDA integral component of mitochondrial outer membrane
GO:0032526 IEA response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058601 gdap1 ganglioside-induced differentiation-associated protein 1 protein_coding Danio_rerio
ENSMUSG00000025777 Gdap1 ganglioside-induced differentiation-associated-protein 1 protein_coding Mus_musculus

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