C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ER membrane protein complex subunit 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104412 EMC2 9606 + 8:108443601-108486918 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000220853 EMC2-001 108443624-108486912 protein_coding
  ENST00000517593 EMC2-004 108443633-108456073 retained_intron
  ENST00000517784 EMC2-006 108443637-108470962 processed_transcript
  ENST00000519450 EMC2-002 108473851-108486918 retained_intron
  ENST00000519642 EMC2-007 108450431-108486563 protein_coding
  ENST00000520294 EMC2-005 108464047-108486636 processed_transcript
  ENST00000524143 EMC2-003 108443601-108455902 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000220853ENST00000517784ENST00000519450ENST00000519642ENST00000520294
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000220853 10.737±0.00 11.186±0.00 2.934±0.00 18.788±3.75 7.300±4.34 10.046±6.30 3.451±0.67 8.249±6.01 5.339±0.40 8.861±3.27 8.761±3.22 16.902±5.98 8.501±2.11 24.463±0.48
ENST00000517784 N/A N/A N/A 8.201±0.00 10.295±0.00 4.170±0.00 2.596±0.00 12.649±0.00 N/A N/A N/A 5.168±0.00 N/A N/A
ENST00000519450 N/A N/A 1.292±0.00 N/A 1.667±0.00 1.491±0.00 0.923±0.00 N/A 2.074±0.00 2.259±0.00 0.589±0.00 2.497±0.00 N/A N/A
ENST00000519642 9.013±0.00 N/A N/A 34.227±0.00 12.059±0.00 14.441±0.00 N/A N/A N/A 10.298±0.00 N/A N/A N/A 26.133±0.00
ENST00000520294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.291±0.00 6.086±0.00 42.394±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T2 CIL_0004T2_0002 CGP 8:108201216-108486918
CIL_0004T3 CIL_0004T3_0002 CGP 8:108443601-108787615

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005783 IDA endoplasmic reticulum
GO:0072546 IDA ER membrane protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003308 emc2 ER membrane protein complex subunit 2 protein_coding Danio_rerio
ENSMUSG00000022337 Emc2 ER membrane protein complex subunit 2 protein_coding Mus_musculus

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