C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UBX domain protein 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104691 UBXN8 9606 + 8:30732247-30767006 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265616 UBXN8-002 30744165-30767006 protein_coding
  ENST00000341403 UBXN8-004 30744189-30766905 protein_coding
  ENST00000380154 UBXN8-001 30744174-30767006 nonsense_mediated_decay
  ENST00000518059 UBXN8-007 30751397-30763322 nonsense_mediated_decay
  ENST00000522968 UBXN8-009 30732619-30751518 protein_coding
  ENST00000613013 UBXN8-005 30763146-30766552 retained_intron
  ENST00000615729 UBXN8-003 30744190-30766394 protein_coding
  ENST00000616306 UBXN8-010 30733216-30734324 processed_transcript
  ENST00000620074 UBXN8-008 30732247-30766470 protein_coding
  ENST00000620706 UBXN8-006 30756119-30766475 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265616ENST00000341403ENST00000380154ENST00000613013ENST00000615729ENST00000620074ENST00000620706
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265616 0.779±0.00 1.428±0.00 0.127±0.00 1.335±0.23 2.970±1.81 0.759±0.07 0.091±0.00 4.955±0.00 1.322±0.00 0.926±0.00 N/A 5.986±5.45 5.292±1.92 2.614±0.00
ENST00000341403 0.439±0.00 N/A N/A N/A N/A 1.041±0.00 0.070±0.00 N/A 2.098±0.00 0.482±0.00 0.562±0.00 N/A N/A N/A
ENST00000380154 0.522±0.00 1.335±0.00 0.292±0.00 0.652±0.29 N/A 0.272±0.00 0.465±0.00 1.354±0.00 N/A 0.573±0.02 0.437±0.00 11.288±7.91 0.768±0.00 2.097±0.55
ENST00000613013 N/A N/A 2.144±0.00 4.381±0.00 N/A 1.023±0.00 N/A 5.005±0.00 1.132±0.00 3.017±0.00 N/A 9.291±0.00 N/A N/A
ENST00000615729 N/A N/A N/A 1.836±0.00 5.197±0.00 2.408±0.00 N/A N/A 4.014±0.00 N/A N/A N/A N/A 8.398±0.00
ENST00000620074 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.722±0.00 N/A 6.653±0.00 N/A N/A
ENST00000620706 1.380±0.00 2.060±0.00 N/A N/A N/A 1.528±0.00 N/A N/A N/A N/A 0.634±0.00 2.918±1.14 3.665±0.00 12.837±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004523 IEA RNA-DNA hybrid ribonuclease activity
GO:0005515 IEA protein binding
GO:0007338 TAS single fertilization
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:0030433 IMP ER-associated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053012 ubxn8 UBX domain protein 8 protein_coding Danio_rerio
ENSMUSG00000052906 Ubxn8 UBX domain protein 8 protein_coding Mus_musculus

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