C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin folding cofactor B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105254 TBCB 9606 + 19:36114289-36125947 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221855 TBCB-001 36114986-36125945 protein_coding
  ENST00000392178 TBCB-003 36115484-36121885 processed_transcript
  ENST00000468156 TBCB-004 36121895-36125945 processed_transcript
  ENST00000481742 TBCB-002 36115483-36116752 retained_intron
  ENST00000585746 TBCB-006 36115838-36125945 protein_coding
  ENST00000585910 TBCB-008 36120482-36125733 retained_intron
  ENST00000586868 TBCB-005 36116072-36125947 protein_coding
  ENST00000588385 TBCB-009 36115813-36125709 protein_coding
  ENST00000589308 TBCB-007 36115828-36121843 processed_transcript
  ENST00000589624 TBCB-014 36115822-36120806 nonsense_mediated_decay
  ENST00000589996 TBCB-012 36115519-36125778 protein_coding
  ENST00000591296 TBCB-015 36115612-36120763 protein_coding
  ENST00000593075 TBCB-011 36114289-36115551 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000221855ENST00000468156ENST00000585746ENST00000586868ENST00000589996
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000221855 N/A N/A 0.936±0.00 8.995±0.00 N/A 2.509±0.00 N/A N/A 1.633±0.00 N/A N/A 19.765±14.30 5.725±0.00 N/A
ENST00000468156 N/A N/A 1.559±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585746 26.922±0.00 54.865±0.00 N/A 60.022±42.56 19.542±13.50 32.348±0.00 14.690±11.35 24.235±21.57 9.559±3.00 38.849±0.00 14.213±4.54 43.781±32.22 54.281±27.50 53.422±26.10
ENST00000586868 N/A N/A N/A 53.793±16.97 N/A N/A N/A N/A N/A 5.528±0.00 N/A 35.598±0.00 N/A N/A
ENST00000589996 20.097±0.00 50.474±0.00 3.226±0.00 65.715±35.60 16.552±10.14 17.960±12.16 12.594±2.80 21.665±18.11 7.487±0.00 6.437±0.00 N/A 30.509±13.46 33.420±2.82 61.369±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005874 IEA microtubule
GO:0007399 IEA nervous system development
GO:0015630 TAS microtubule cytoskeleton
GO:0030154 IEA cell differentiation
GO:0044267 TAS cellular protein metabolic process
GO:0051084 TAS 'de novo' posttranslational protein folding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068404 tbcb tubulin folding cofactor B protein_coding Danio_rerio
ENSMUSG00000006095 Tbcb tubulin folding cofactor B protein_coding Mus_musculus

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