C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glioma tumor suppressor candidate region gene 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105373 GLTSCR2 9606 + 19:47745522-47757058 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000246802 GLTSCR2-001 47745522-47757058 protein_coding
  ENST00000594182 GLTSCR2-013 47755474-47757057 protein_coding
  ENST00000594525 GLTSCR2-002 47745551-47752709 retained_intron
  ENST00000595143 GLTSCR2-011 47750178-47757005 protein_coding
  ENST00000597985 GLTSCR2-009 47750246-47757058 protein_coding
  ENST00000598285 GLTSCR2-012 47756530-47757048 retained_intron
  ENST00000598681 GLTSCR2-004 47745565-47756744 processed_transcript
  ENST00000598959 GLTSCR2-010 47751037-47757058 protein_coding
  ENST00000599253 GLTSCR2-006 47745573-47746686 processed_transcript
  ENST00000599582 GLTSCR2-007 47745891-47752553 processed_transcript
  ENST00000600266 GLTSCR2-008 47750236-47751522 retained_intron
  ENST00000600410 GLTSCR2-003 47745565-47757057 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000246802ENST00000594182ENST00000594525ENST00000595143ENST00000597985ENST00000598681ENST00000598959
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000246802 183.054±0.00 196.277±0.00 5.225±0.00 25.363±20.72 154.868±139.98 175.426±161.04 20.808±17.45 42.278±30.72 29.044±0.33 121.689±107.43 34.063±23.27 453.580±400.91 156.228±107.76 59.646±53.26
ENST00000594182 N/A N/A N/A N/A N/A N/A N/A 21.266±0.00 N/A N/A N/A N/A 27.336±0.00 19.444±0.00
ENST00000594525 N/A N/A 1.767±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.923±0.00 20.532±0.00
ENST00000595143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 93.769±65.94 48.561±23.78 15.429±0.00
ENST00000597985 N/A N/A N/A N/A N/A N/A 29.559±0.00 28.111±0.00 23.642±0.00 179.160±0.00 49.124±0.00 N/A N/A N/A
ENST00000598681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 71.033±0.00 N/A N/A
ENST00000598959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.839±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 NAS intracellular
GO:0005730 IDA nucleolus
GO:0008150 ND biological_process
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013489 gltscr2 glioma tumor suppressor candidate region gene 2 protein_coding Danio_rerio
ENSMUSG00000041560 Gltscr2 glioma tumor suppressor candidate region gene 2 protein_coding Mus_musculus

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