C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carcinoembryonic antigen-related cell adhesion molecule 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105388 CEACAM5 9606 + 19:41576273-41729798 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221992 CEACAM5-001 41708618-41729798 protein_coding
  ENST00000398599 CEACAM5-002 41708585-41729345 protein_coding
  ENST00000405816 CEACAM5-003 41708649-41729335 protein_coding
  ENST00000460121 CEACAM5-004 41708621-41710083 retained_intron
  ENST00000595113 CEACAM5-006 41709914-41717630 protein_coding
  ENST00000595403 CEACAM5-007 41709716-41720028 protein_coding
  ENST00000596606 CEACAM5-005 41708626-41715870 retained_intron
  ENST00000615021 CEACAM5-201 41708649-41727352 protein_coding
  ENST00000616453 CEACAM5-202 41708649-41727352 protein_coding
  ENST00000617332 CEACAM5-203 41708649-41727352 protein_coding
  ENST00000621956 CEACAM5-204 41576273-41727319 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyMuscleOvaryENST00000221992ENST00000398599
Transcript ID Adipose Brain Breast Colon Heart Kidney Muscle Ovary
ENST00000221992 0.782±0.00 0.101±0.00 161.461±0.00 44.182±39.38 0.021±0.00 0.085±0.02 0.072±0.00 77.647±90.28
ENST00000398599 N/A 0.112±0.00 N/A N/A 0.032±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TR CIL_0008TR_0001 VISTA 19:41131081-41732986
CIL_0003UJ CIL_0003UJ_0008 CGP 19:41549518-41729798
CIL_0003UJ CIL_0003UJ_000D CGP 19:41576273-41729798

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005887 IDA integral component of plasma membrane
GO:0010832 IDA negative regulation of myotube differentiation
GO:0016323 IDA basolateral plasma membrane
GO:0031225 IEA anchored component of membrane
GO:0034109 IDA homotypic cell-cell adhesion
GO:0034235 IMP GPI anchor binding
GO:0042802 IPI identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0043066 IDA negative regulation of apoptotic process
GO:0070062 IDA extracellular vesicular exosome
GO:0071575 IDA integral component of external side of plasma membrane
GO:2000811 IDA negative regulation of anoikis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041119 ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 protein_coding Danio_rerio
ENSDARG00000076981 zgc:198329 zgc:198329 protein_coding Danio_rerio
ENSDARG00000078177 cxcr3.1 chemokine (C-X-C motif) receptor 3, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000079372 si:ch211-264f5.6 si:ch211-264f5.6 protein_coding Danio_rerio
ENSDARG00000092520 si:dkey-250k15.10 si:dkey-250k15.10 protein_coding Danio_rerio
ENSDARG00000093279 si:dkey-11o1.3 si:dkey-11o1.3 protein_coding Danio_rerio
ENSDARG00000095048 si:dkey-250k15.7 si:dkey-250k15.7 protein_coding Danio_rerio
ENSDARG00000095134 si:dkey-250k15.9 si:dkey-250k15.9 protein_coding Danio_rerio
ENSDARG00000095772 si:dkey-11o1.2 si:dkey-11o1.2 protein_coding Danio_rerio
ENSMUSG00000054385 Ceacam2 carcinoembryonic antigen-related cell adhesion molecule 2 protein_coding Mus_musculus
ENSMUSG00000074272 Ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 protein_coding Mus_musculus

Loading