C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Meis homeobox 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105419 MEIS3 9606 - 19:47403124-47419523 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331559 MEIS3-001 47403124-47419523 protein_coding
  ENST00000441740 MEIS3-002 47403124-47419315 protein_coding
  ENST00000557833 MEIS3-013 47414836-47419152 protein_coding
  ENST00000558555 MEIS3-005 47403172-47419269 protein_coding
  ENST00000559338 MEIS3-014 47407469-47416725 protein_coding
  ENST00000559524 MEIS3-003 47405956-47419122 protein_coding
  ENST00000560245 MEIS3-008 47403125-47414938 protein_coding
  ENST00000560253 MEIS3-012 47403128-47412387 processed_transcript
  ENST00000561040 MEIS3-010 47415876-47417898 retained_intron
  ENST00000561096 MEIS3-011 47403125-47417792 protein_coding
  ENST00000561204 MEIS3-009 47403124-47418801 retained_intron
  ENST00000561293 MEIS3-007 47403126-47419288 protein_coding
  ENST00000607330 MEIS3-015 47415063-47419523 processed_transcript
  ENST00000607695 MEIS3-016 47407098-47409152 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331559ENST00000441740ENST00000558555ENST00000559524ENST00000560245ENST00000560253ENST00000561040ENST00000561204ENST00000607330ENST00000607695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331559 N/A N/A N/A N/A 0.649±0.00 N/A N/A 0.768±0.00 N/A N/A N/A N/A 2.255±0.00 N/A
ENST00000441740 N/A 2.337±0.00 N/A 3.409±0.45 1.575±0.00 N/A 1.232±0.00 N/A 0.881±0.00 1.462±0.00 N/A 2.244±1.80 2.486±1.24 2.834±0.00
ENST00000558555 4.305±0.00 N/A N/A 4.513±0.00 0.753±0.00 3.634±0.00 0.058±0.00 2.032±0.00 0.240±0.00 N/A N/A 7.467±1.56 6.749±1.59 N/A
ENST00000559524 N/A 3.429±0.00 N/A 4.680±0.00 0.890±0.00 2.549±0.00 0.770±0.00 N/A 0.131±0.00 0.325±0.00 0.111±0.00 2.537±0.52 N/A 3.497±0.37
ENST00000560245 3.648±0.00 3.046±0.00 N/A 8.582±0.00 2.982±0.00 3.323±0.00 N/A N/A 0.826±0.58 1.394±0.00 0.204±0.00 7.973±3.10 8.703±0.00 7.778±3.89
ENST00000560253 N/A N/A N/A N/A 0.968±0.00 0.279±0.00 0.043±0.00 N/A N/A N/A 1.139±0.00 N/A N/A N/A
ENST00000561040 N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000561204 N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607330 N/A N/A N/A N/A 1.568±0.00 0.842±0.00 N/A N/A N/A 0.764±0.00 N/A N/A N/A N/A
ENST00000607695 N/A N/A N/A N/A N/A N/A N/A 2.648±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0001 VISTA 19:46806794-47408636

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0051897 IEA positive regulation of protein kinase B signaling
GO:2001234 IEA negative regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000041420 Meis3 Meis homeobox 3 protein_coding Mus_musculus

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