C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sialic acid binding Ig-like lectin 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105492 SIGLEC6 9606 - 19:51519525-51531856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343300 SIGLEC6-003 51519730-51531856 protein_coding
  ENST00000346477 SIGLEC6-002 51519525-51531717 protein_coding
  ENST00000359982 SIGLEC6-005 51519730-51531794 protein_coding
  ENST00000391797 SIGLEC6-008 51519999-51531803 protein_coding
  ENST00000425629 SIGLEC6-001 51519747-51531803 protein_coding
  ENST00000436458 SIGLEC6-007 51519730-51531803 protein_coding
  ENST00000474054 SIGLEC6-009 51519966-51528447 processed_transcript
  ENST00000489837 SIGLEC6-004 51529519-51531803 retained_intron
  ENST00000496422 SIGLEC6-006 51529390-51531803 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungOvaryPlacentaTestisENST00000343300ENST00000346477ENST00000391797ENST00000474054ENST00000489837ENST00000496422
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000343300 N/A N/A 0.135±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000346477 N/A N/A 0.073±0.00 0.051±0.00 N/A 0.264±0.00 0.167±0.00 0.061±0.02 9.603±0.00 0.089±0.00
ENST00000391797 N/A N/A N/A N/A N/A N/A 0.143±0.09 N/A N/A N/A
ENST00000474054 N/A 0.325±0.00 N/A N/A N/A N/A N/A N/A N/A 0.058±0.00
ENST00000489837 0.086±0.00 N/A N/A 0.056±0.00 0.069±0.00 0.084±0.00 0.291±0.00 0.059±0.00 10.892±0.00 N/A
ENST00000496422 N/A 0.218±0.00 N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005887 TAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0007267 TAS cell-cell signaling
GO:0016020 TAS membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089404 SIGLEC8 sialic acid binding Ig-like lectin 8 protein_coding Danio_rerio

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