C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105642 KCNN1 9606 + 19:17951293-18000080 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000222249 KCNN1-001 17951293-18000080 protein_coding
  ENST00000594192 KCNN1-005 17952185-17954653 processed_transcript
  ENST00000609922 KCNN1-004 17967125-17974113 protein_coding
  ENST00000615435 KCNN1-201 17973869-17998445 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222249ENST00000615435
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222249 0.155±0.00 0.335±0.00 N/A 0.122±0.00 0.226±0.00 0.028±0.00 0.199±0.00 0.055±0.00 0.230±0.00 0.071±0.00 0.225±0.14 0.026±0.00 0.425±0.00
ENST00000615435 N/A N/A 6.955±4.87 N/A 0.070±0.00 N/A N/A N/A N/A N/A 1.705±0.98 0.221±0.00 1.695±0.90

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005516 IBA:IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005886 IBA plasma membrane
GO:0006813 TAS:IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 TAS voltage-gated potassium channel complex
GO:0015269 TAS:IEA calcium-activated potassium channel activity
GO:0016021 IEA integral component of membrane
GO:0016286 IBA:IEA small conductance calcium-activated potassium channel activity
GO:0043025 IBA neuronal cell body
GO:0046982 IEA protein heterodimerization activity
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023546 kcnn1b potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b protein_coding Danio_rerio
ENSDARG00000091306 kcnn1a potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a protein_coding Danio_rerio
ENSMUSG00000002908 Kcnn1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 protein_coding Mus_musculus

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