C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal-induced proliferation-associated 1 like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105738 SIPA1L3 9606 + 19:37907228-38208372 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000222345 SIPA1L3-001 37907228-38208372 protein_coding
  ENST00000476317 SIPA1L3-002 37932346-38081448 processed_transcript
  ENST00000594553 SIPA1L3-008 38110199-38119493 retained_intron
  ENST00000595384 SIPA1L3-006 38099982-38110315 nonsense_mediated_decay
  ENST00000595495 SIPA1L3-011 38164771-38182966 retained_intron
  ENST00000595982 SIPA1L3-005 38087756-38088851 protein_coding
  ENST00000596403 SIPA1L3-013 38203692-38206390 retained_intron
  ENST00000599644 SIPA1L3-004 37907245-37907974 processed_transcript
  ENST00000600919 SIPA1L3-010 38119833-38131735 protein_coding
  ENST00000601054 SIPA1L3-012 38173626-38193676 protein_coding
  ENST00000601222 SIPA1L3-007 38109664-38110359 retained_intron
  ENST00000601881 SIPA1L3-009 38119649-38130831 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222345ENST00000594553ENST00000596403ENST00000599644ENST00000601881
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222345 2.341±0.00 2.504±0.00 1.575±0.95 1.215±0.53 2.679±1.36 0.445±0.00 1.810±1.34 0.624±0.02 4.034±0.00 0.474±0.20 3.267±2.55 0.947±0.18 3.994±0.41
ENST00000594553 N/A N/A N/A N/A N/A N/A 6.739±0.00 9.062±0.00 N/A N/A N/A N/A N/A
ENST00000596403 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.811±0.00 N/A N/A N/A
ENST00000599644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.317±0.00 N/A N/A
ENST00000601881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.148±0.00 8.193±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061699 SIPA1L3 signal-induced proliferation-associated 1 like 3 protein_coding Danio_rerio
ENSMUSG00000030583 Sipa1l3 signal-induced proliferation-associated 1 like 3 protein_coding Mus_musculus

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