C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PHD finger protein 14
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106443 PHF14 9606 + 7:10973872-11169623 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000403050 PHF14-001 10973872-11103655 protein_coding
  ENST00000423760 PHF14-002 10973889-11169623 nonsense_mediated_decay
  ENST00000469407 PHF14-005 11108887-11169623 processed_transcript
  ENST00000470665 PHF14-006 11061285-11169623 retained_intron
  ENST00000473050 PHF14-004 11110981-11169623 retained_intron
  ENST00000476009 PHF14-012 10973889-11028760 processed_transcript
  ENST00000476774 PHF14-011 11013821-11015219 processed_transcript
  ENST00000481418 PHF14-010 11042680-11103682 processed_transcript
  ENST00000489305 PHF14-009 11061816-11062993 retained_intron
  ENST00000490957 PHF14-014 10973907-11063072 retained_intron
  ENST00000493922 PHF14-003 11108561-11169623 processed_transcript
  ENST00000497851 PHF14-007 11035585-11036833 retained_intron
  ENST00000498784 PHF14-008 11061750-11062589 retained_intron
  ENST00000521747 PHF14-015 10973872-11102646 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000403050ENST00000423760ENST00000490957ENST00000497851ENST00000521747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000403050 0.787±0.00 1.609±0.00 N/A 4.039±0.00 N/A N/A 0.432±0.00 N/A 0.766±0.00 N/A 0.212±0.00 1.332±0.14 N/A 1.940±0.17
ENST00000423760 N/A N/A 2.655±0.00 N/A 3.067±0.00 1.696±0.00 1.413±0.05 N/A 1.490±0.00 1.891±0.00 N/A 3.442±0.08 1.391±0.00 N/A
ENST00000490957 N/A N/A N/A N/A 2.460±0.00 1.013±0.00 N/A 1.066±0.00 1.269±0.00 2.044±0.00 0.180±0.00 1.702±0.00 N/A N/A
ENST00000497851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.840±0.00 N/A N/A N/A
ENST00000521747 N/A N/A N/A 7.049±1.98 N/A N/A N/A 2.606±0.00 3.303±0.00 1.881±0.90 0.341±0.23 5.913±3.50 5.399±0.00 4.676±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022Q CIL_00022Q_0001 CGP 7:10931951-11169623

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0008285 IEA negative regulation of cell proliferation
GO:0048286 IEA lung alveolus development
GO:0072201 IEA negative regulation of mesenchymal cell proliferation
GO:2000584 IEA negative regulation of platelet-derived growth factor receptor-alpha signaling pathway
GO:2000791 IEA negative regulation of mesenchymal cell proliferation involved in lung development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061458 phf14 PHD finger protein 14 protein_coding Danio_rerio
ENSMUSG00000029629 Phf14 PHD finger protein 14 protein_coding Mus_musculus

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