C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome c oxidase assembly factor 1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106603 COA1 9606 - 7:43608456-43729717 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000223336 COA1-201 43639247-43729541 protein_coding
  ENST00000310564 COA1-003 43639257-43729489 protein_coding
  ENST00000395879 COA1-004 43639257-43650296 protein_coding
  ENST00000415076 COA1-007 43608456-43729513 nonsense_mediated_decay
  ENST00000415798 COA1-013 43640573-43729523 protein_coding
  ENST00000418140 COA1-011 43646472-43729483 nonsense_mediated_decay
  ENST00000420441 COA1-014 43648188-43729510 nonsense_mediated_decay
  ENST00000431651 COA1-015 43645251-43729505 protein_coding
  ENST00000438444 COA1-001 43631152-43729717 nonsense_mediated_decay
  ENST00000446330 COA1-002 43608819-43729513 nonsense_mediated_decay
  ENST00000446564 COA1-012 43609233-43729483 nonsense_mediated_decay
  ENST00000448704 COA1-010 43647228-43729501 nonsense_mediated_decay
  ENST00000451651 COA1-018 43646297-43729474 nonsense_mediated_decay
  ENST00000457939 COA1-016 43647351-43729497 nonsense_mediated_decay
  ENST00000459713 COA1-009 43647216-43648754 processed_transcript
  ENST00000470156 COA1-008 43647275-43729483 processed_transcript
  ENST00000478504 COA1-017 43657222-43729499 processed_transcript
  ENST00000488813 COA1-005 43639257-43642164 processed_transcript
  ENST00000490251 COA1-006 43638799-43646425 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223336ENST00000310564ENST00000395879ENST00000415076ENST00000418140ENST00000438444ENST00000446330ENST00000446564ENST00000490251
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223336 6.798±0.00 16.359±0.00 N/A 6.787±4.85 8.500±0.00 3.822±0.00 10.149±8.30 15.622±0.00 4.226±0.00 6.161±0.00 6.975±0.00 12.220±1.10 6.389±1.10 7.911±0.00
ENST00000310564 N/A N/A N/A N/A N/A N/A 1.399±0.00 N/A 1.494±0.00 3.914±0.00 N/A N/A 2.927±0.00 N/A
ENST00000395879 N/A N/A 0.809±0.00 N/A N/A 1.270±0.00 N/A N/A 2.662±0.00 N/A N/A N/A N/A N/A
ENST00000415076 N/A N/A 0.785±0.00 1.793±0.73 2.415±0.01 1.506±0.64 N/A N/A 1.762±0.45 1.485±0.00 0.653±0.00 5.141±1.20 1.335±0.48 2.043±0.00
ENST00000418140 N/A N/A N/A N/A N/A N/A N/A 0.970±0.00 N/A N/A N/A N/A N/A N/A
ENST00000438444 0.611±0.00 N/A 0.632±0.00 1.077±0.68 1.184±0.00 1.010±0.00 2.027±0.00 N/A 1.549±0.00 N/A 0.629±0.00 1.818±0.54 0.865±0.09 1.622±0.00
ENST00000446330 N/A N/A 0.862±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.757±0.00 N/A
ENST00000446564 1.776±0.00 N/A N/A 3.593±0.00 4.858±0.00 2.022±0.00 N/A N/A 1.583±0.00 3.009±0.00 1.818±0.00 N/A 1.174±0.00 N/A
ENST00000490251 N/A N/A 0.911±0.00 0.542±0.00 2.532±0.00 0.999±0.00 0.629±0.00 N/A N/A N/A 1.428±0.00 2.393±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0031305 IDA integral component of mitochondrial inner membrane
GO:0032981 IMP mitochondrial respiratory chain complex I assembly
GO:0033617 IMP mitochondrial respiratory chain complex IV assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076360 rpl37 ribosomal protein L37 protein_coding Danio_rerio

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