C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (DNA directed), delta 2, accessory subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106628 POLD2 9606 - 7:44114681-44124358 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000223361 POLD2-003 44114699-44122196 protein_coding
  ENST00000406581 POLD2-001 44114687-44123508 protein_coding
  ENST00000418438 POLD2-005 44117641-44123668 protein_coding
  ENST00000433715 POLD2-004 44116937-44124358 protein_coding
  ENST00000436400 POLD2-017 44115821-44116510 protein_coding
  ENST00000436844 POLD2-010 44116117-44123537 protein_coding
  ENST00000452185 POLD2-002 44114785-44123530 protein_coding
  ENST00000456038 POLD2-007 44117619-44123029 protein_coding
  ENST00000461116 POLD2-012 44117517-44121905 retained_intron
  ENST00000463464 POLD2-011 44117063-44122109 retained_intron
  ENST00000464871 POLD2-014 44117314-44118093 retained_intron
  ENST00000467469 POLD2-013 44117577-44118304 retained_intron
  ENST00000470867 POLD2-009 44117149-44123532 retained_intron
  ENST00000481104 POLD2-015 44116903-44117560 retained_intron
  ENST00000481763 POLD2-006 44122088-44123496 processed_transcript
  ENST00000489883 POLD2-016 44114688-44115564 retained_intron
  ENST00000496539 POLD2-008 44117793-44123533 retained_intron
  ENST00000610533 POLD2-201 44114681-44123559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223361ENST00000433715ENST00000436400ENST00000436844ENST00000452185ENST00000456038ENST00000463464ENST00000467469ENST00000610533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223361 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.752±0.00 N/A N/A N/A N/A
ENST00000433715 N/A N/A N/A N/A N/A N/A 1.424±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000436400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 105.168±0.00 44.917±0.00 82.468±0.00
ENST00000436844 13.602±0.00 24.385±0.00 N/A N/A 23.353±0.00 13.399±0.00 N/A N/A N/A N/A N/A 28.118±0.00 N/A 37.910±0.00
ENST00000452185 2.785±0.00 N/A 0.579±0.00 4.078±0.00 1.219±0.00 2.879±1.87 5.211±0.00 N/A 8.965±0.00 1.489±0.00 N/A 9.182±0.08 6.965±4.71 N/A
ENST00000456038 N/A N/A N/A N/A N/A 2.298±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463464 N/A N/A 0.691±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 46.351±0.00 21.760±0.00 34.072±0.00
ENST00000467469 N/A N/A N/A N/A 2.249±0.00 N/A N/A N/A N/A N/A 4.849±0.00 N/A N/A N/A
ENST00000610533 15.449±0.00 29.139±0.00 N/A 12.363±8.21 15.731±14.49 8.463±6.54 11.425±9.41 22.463±14.35 19.728±16.53 9.936±9.20 25.515±20.35 25.573±16.05 22.585±11.67 29.675±7.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IZ CIL_0000IZ_0001 CGP 7:44104361-44124358
CIL_0000J0 CIL_0000J0_0001 CGP 7:44114681-44141332

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000722 TAS telomere maintenance via recombination
GO:0000723 TAS telomere maintenance
GO:0003677 IEA DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006260 IEA DNA replication
GO:0006261 IEA DNA-dependent DNA replication
GO:0006271 TAS DNA strand elongation involved in DNA replication
GO:0006281 TAS DNA repair
GO:0006283 TAS transcription-coupled nucleotide-excision repair
GO:0006284 TAS base-excision repair
GO:0006289 TAS nucleotide-excision repair
GO:0006297 TAS nucleotide-excision repair, DNA gap filling
GO:0032201 TAS telomere maintenance via semi-conservative replication
GO:0043625 IEA delta DNA polymerase complex
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095046 pold2 polymerase (DNA directed), delta 2, regulatory subunit protein_coding Danio_rerio
ENSMUSG00000020471 Pold2 polymerase (DNA directed), delta 2, regulatory subunit protein_coding Mus_musculus

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