C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transducin (beta)-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106638 TBL2 9606 - 7:73568932-73578791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305632 TBL2-001 73568932-73578791 protein_coding
  ENST00000417008 TBL2-005 73570008-73578554 nonsense_mediated_decay
  ENST00000424598 TBL2-004 73569660-73578576 nonsense_mediated_decay
  ENST00000426966 TBL2-010 73570886-73578619 nonsense_mediated_decay
  ENST00000432538 TBL2-006 73570195-73578336 protein_coding
  ENST00000433464 TBL2-002 73570411-73578599 nonsense_mediated_decay
  ENST00000435792 TBL2-009 73572878-73578676 nonsense_mediated_decay
  ENST00000437521 TBL2-014 73572848-73578371 nonsense_mediated_decay
  ENST00000450285 TBL2-003 73569660-73578590 nonsense_mediated_decay
  ENST00000452125 TBL2-015 73573321-73578354 nonsense_mediated_decay
  ENST00000452475 TBL2-016 73571584-73578634 processed_transcript
  ENST00000458466 TBL2-011 73574477-73578599 nonsense_mediated_decay
  ENST00000459913 TBL2-007 73569660-73578269 processed_transcript
  ENST00000465279 TBL2-017 73573401-73578347 processed_transcript
  ENST00000468669 TBL2-018 73574445-73578317 processed_transcript
  ENST00000469518 TBL2-019 73573879-73576748 retained_intron
  ENST00000476136 TBL2-013 73573341-73578419 processed_transcript
  ENST00000479892 TBL2-008 73573343-73578791 protein_coding
  ENST00000488915 TBL2-021 73570471-73571394 retained_intron
  ENST00000495885 TBL2-020 73571982-73573332 retained_intron
  ENST00000496056 TBL2-012 73573832-73578576 retained_intron
  ENST00000610724 TBL2-201 73569665-73578560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000305632ENST00000417008ENST00000424598ENST00000426966ENST00000433464ENST00000435792ENST00000450285ENST00000452475ENST00000610724
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000305632 2.533±0.00 2.728±0.00 0.647±0.00 1.045±0.37 2.159±0.13 2.132±0.03 0.379±0.05 2.507±0.13 1.488±0.47 2.338±0.98 N/A 5.831±2.21 3.464±0.72 19.179±8.82
ENST00000417008 N/A N/A N/A N/A N/A N/A 0.778±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000424598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.876±4.71 2.127±0.00 N/A
ENST00000426966 N/A N/A N/A N/A N/A N/A 0.316±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000433464 N/A N/A N/A N/A N/A N/A N/A 3.769±0.00 N/A N/A N/A N/A N/A N/A
ENST00000435792 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.287±0.00 N/A N/A N/A N/A
ENST00000450285 N/A N/A N/A 1.421±0.00 3.970±0.00 2.621±0.00 0.242±0.00 4.564±0.00 2.683±0.87 2.189±0.00 2.006±0.00 2.793±0.00 4.352±0.00 23.708±0.00
ENST00000452475 N/A N/A N/A 1.561±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610724 6.195±0.00 6.186±0.00 0.269±0.00 4.230±0.00 3.889±1.60 2.087±1.01 2.298±0.00 4.620±0.00 2.414±0.00 2.092±1.46 4.291±0.00 12.225±1.84 11.578±1.67 91.017±37.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052O CIL_00052O_0002 CGP 7:73536356-73578791

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043357 tbl2 transducin (beta)-like 2 protein_coding Danio_rerio
ENSDARG00000074603 tbl2 transducin (beta)-like 2 protein_coding Danio_rerio
ENSMUSG00000005374 Tbl2 transducin (beta)-like 2 protein_coding Mus_musculus

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