C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypeptide N-acetylgalactosaminyltransferase-like 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106648 GALNTL5 9606 + 7:151956379-152019934 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000392800 GALNTL5-001 151956395-152019934 protein_coding
  ENST00000414073 GALNTL5-006 151956449-152019929 nonsense_mediated_decay
  ENST00000416062 GALNTL5-002 151956402-152019856 nonsense_mediated_decay
  ENST00000416269 GALNTL5-004 151956426-152019928 nonsense_mediated_decay
  ENST00000426341 GALNTL5-003 151956422-152019801 nonsense_mediated_decay
  ENST00000431418 GALNTL5-008 151956379-152019926 protein_coding
  ENST00000448366 GALNTL5-005 151956409-152019842 nonsense_mediated_decay
  ENST00000468278 GALNTL5-009 151970615-151983106 processed_transcript
  ENST00000482845 GALNTL5-007 151956462-151960686 processed_transcript
  ENST00000483959 GALNTL5-010 151994939-152007944 processed_transcript
  ENST00000616416 GALNTL5-201 151956447-152019926 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLungTestisENST00000414073ENST00000416062ENST00000416269ENST00000426341ENST00000431418ENST00000483959ENST00000616416
Transcript ID Adipose Brain Lung Testis
ENST00000414073 0.031±0.00 N/A N/A N/A
ENST00000416062 N/A N/A N/A 1.050±0.00
ENST00000416269 N/A N/A N/A 0.657±0.00
ENST00000426341 N/A N/A N/A 3.826±0.00
ENST00000431418 N/A N/A N/A 1.743±0.00
ENST00000483959 N/A 0.214±0.00 0.079±0.00 N/A
ENST00000616416 N/A N/A N/A 3.547±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T7 CIL_0007T7_0001 VISTA 7:151442692-152046426
CIL_0007T1 CIL_0007T1_0001 VISTA 7:151456863-152060019

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005768 IEA endosome
GO:0007286 IMP spermatid development
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016740 IEA transferase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063636 galnt11 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) protein_coding Danio_rerio
ENSMUSG00000028938 Galntl5 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 protein_coding Mus_musculus

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