C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Src homology 2 domain containing adaptor protein B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107338 SHB 9606 - 9:37919134-38069211 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000377707 SHB-001 37919134-38069211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryPlacentaENST00000377707
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000377707 3.856±0.00 16.259±0.00 5.757±0.00 6.793±4.66 5.740±0.00 11.079±6.60 19.158±16.74 16.470±7.02 12.770±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081A CIL_00081A_0001 VISTA 9:37738698-38340102
CIL_0006TM CIL_0006TM_0001 CGP 9:37879400-38069211
CIL_0006TL CIL_0006TL_0001 CGP 9:37919134-38398661

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006915 IEA apoptotic process
GO:0007165 TAS signal transduction
GO:0009967 TAS positive regulation of signal transduction
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000044813 Shb src homology 2 domain-containing transforming protein B protein_coding Mus_musculus

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