C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA binding domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107897 ACBD5 9606 - 10:27195214-27242130 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375888 ACBD5-005 27197353-27240558 protein_coding
  ENST00000375897 ACBD5-201 27195215-27240879 protein_coding
  ENST00000375901 ACBD5-003 27195217-27242088 protein_coding
  ENST00000375905 ACBD5-002 27195217-27242130 protein_coding
  ENST00000396271 ACBD5-001 27195214-27240815 protein_coding
  ENST00000412279 ACBD5-007 27217983-27242090 protein_coding
  ENST00000426079 ACBD5-006 27217980-27240850 protein_coding
  ENST00000476758 ACBD5-004 27204447-27240582 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375888ENST00000375897ENST00000375901ENST00000375905ENST00000396271ENST00000412279ENST00000426079
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375888 3.927±0.00 N/A 1.582±0.00 6.798±0.00 N/A N/A N/A 9.039±0.00 N/A N/A 0.619±0.00 6.469±4.62 2.268±0.00 6.851±4.18
ENST00000375897 1.642±0.00 1.992±0.00 2.599±0.00 N/A 1.072±0.17 1.810±0.35 1.967±0.78 1.575±0.00 N/A N/A 0.752±0.00 1.869±1.19 0.406±0.00 0.666±0.00
ENST00000375901 N/A 0.661±0.00 N/A 5.209±0.00 1.489±1.03 0.727±0.07 N/A 7.706±0.00 3.639±0.00 1.133±0.00 2.236±0.00 5.633±3.11 1.359±0.00 3.841±0.46
ENST00000375905 3.307±0.00 N/A N/A 3.862±0.73 0.913±0.00 1.032±0.00 3.244±1.53 6.237±2.99 N/A 1.391±0.00 2.354±0.71 6.102±0.00 1.809±1.29 0.974±0.00
ENST00000396271 N/A 0.934±0.00 0.541±0.00 3.452±0.14 2.047±0.99 1.138±0.00 4.399±2.77 N/A 1.996±0.00 2.349±0.39 N/A 1.461±0.30 1.677±0.00 0.783±0.00
ENST00000412279 N/A N/A N/A N/A 1.717±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426079 N/A N/A N/A N/A N/A 2.152±0.00 2.674±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000062 IEA fatty-acyl-CoA binding
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0005777 IDA peroxisome
GO:0006810 IEA transport
GO:0008289 IEA lipid binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030242 IMP peroxisome degradation
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034883 acbd5a acyl-Coenzyme A binding domain containing 5a protein_coding Danio_rerio
ENSDARG00000058410 acbd5b acyl-Coenzyme A binding domain containing 5b protein_coding Danio_rerio
ENSMUSG00000026781 Acbd5 acyl-Coenzyme A binding domain containing 5 protein_coding Mus_musculus

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