C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: galactokinase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108479 GALK1 9606 - 17:75751594-75765711 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000225614 GALK1-002 75751594-75765236 protein_coding
  ENST00000586244 GALK1-003 75762758-75765192 nonsense_mediated_decay
  ENST00000586733 GALK1-008 75757972-75758518 retained_intron
  ENST00000587707 GALK1-006 75758512-75764005 nonsense_mediated_decay
  ENST00000588479 GALK1-001 75757944-75765711 protein_coding
  ENST00000589030 GALK1-005 75763383-75765133 retained_intron
  ENST00000589643 GALK1-009 75751679-75758519 retained_intron
  ENST00000592494 GALK1-004 75758591-75765157 retained_intron
  ENST00000592997 GALK1-007 75757894-75763090 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000225614ENST00000587707ENST00000588479ENST00000589030ENST00000592494ENST00000592997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000225614 8.611±0.00 8.856±0.00 N/A 1.909±1.50 2.884±1.81 1.622±0.89 2.378±2.23 9.402±0.57 27.849±0.00 5.562±0.00 2.247±0.00 7.978±5.76 13.632±5.27 5.649±2.75
ENST00000587707 4.317±0.00 3.507±0.00 1.328±0.00 1.357±0.23 3.709±0.00 1.554±0.58 0.924±0.52 5.689±1.64 15.622±0.00 4.899±0.00 2.273±0.00 2.444±1.07 N/A N/A
ENST00000588479 N/A N/A N/A 0.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589030 N/A N/A N/A N/A 0.633±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592494 N/A N/A 3.444±0.00 N/A 2.059±0.00 0.195±0.00 N/A N/A N/A N/A 1.062±0.00 N/A N/A N/A
ENST00000592997 3.323±0.00 7.583±0.00 N/A N/A 2.739±0.00 3.471±0.00 1.725±0.00 6.224±0.00 17.051±0.00 3.613±0.00 0.559±0.00 10.527±2.74 7.471±1.65 3.844±2.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002K8 CIL_0002K8_0002 CGP 17:75667116-75757818
CIL_00078P CIL_00078P_0001 CGP 17:75721328-75765711
CIL_00078Q CIL_00078Q_0001 CGP 17:75751594-75785893

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004335 IDA:IEA galactokinase activity
GO:0005515 IEA protein binding
GO:0005524 IDA:IEA ATP binding
GO:0005534 IDA galactose binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005975 TAS carbohydrate metabolic process
GO:0006012 IMP:IEA galactose metabolic process
GO:0016020 IDA membrane
GO:0019388 TAS galactose catabolic process
GO:0019402 IEA galactitol metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046835 IEA carbohydrate phosphorylation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028088 galk1 galactokinase 1 protein_coding Danio_rerio
ENSMUSG00000020766 Galk1 galactokinase 1 protein_coding Mus_musculus

Loading