C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108528 SLC25A11 9606 - 17:4937130-4940251 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000225665 SLC25A11-001 4937130-4940251 protein_coding
  ENST00000544061 SLC25A11-003 4937724-4940053 protein_coding
  ENST00000570543 SLC25A11-005 4938154-4938557 retained_intron
  ENST00000574710 SLC25A11-002 4937317-4940030 retained_intron
  ENST00000576951 SLC25A11-004 4937763-4939913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000225665ENST00000574710ENST00000576951
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000225665 10.825±0.00 17.067±0.00 15.046±4.43 10.075±7.42 3.472±0.00 22.897±17.02 8.118±0.00 2.214±0.00 24.804±0.00 24.806±18.16 41.493±10.90 14.219±0.00
ENST00000574710 N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.650±0.00 N/A N/A
ENST00000576951 17.220±0.00 N/A 38.254±0.00 32.425±0.00 N/A 50.256±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WE CIL_0004WE_0001 CGP 17:4932297-4940251
CIL_00009G CIL_00009G_0001 CGP 17:4937130-4945222

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006006 TAS glucose metabolic process
GO:0006094 TAS gluconeogenesis
GO:0006810 TAS transport
GO:0015367 TAS oxoglutarate:malate antiporter activity
GO:0015742 TAS alpha-ketoglutarate transport
GO:0016021 IEA integral component of membrane
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035741 slc25a11 solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 protein_coding Danio_rerio
ENSMUSG00000014606 Slc25a11 solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 protein_coding Mus_musculus

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