C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgi SNAP receptor complex member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108587 GOSR1 9606 + 17:30477362-30527592 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000225724 GOSR1-001 30477362-30527592 protein_coding
  ENST00000414833 GOSR1-009 30477442-30522558 protein_coding
  ENST00000427274 GOSR1-006 30477420-30520432 nonsense_mediated_decay
  ENST00000451249 GOSR1-008 30477377-30522805 protein_coding
  ENST00000467337 GOSR1-002 30477423-30522609 protein_coding
  ENST00000467635 GOSR1-013 30477417-30490350 retained_intron
  ENST00000477885 GOSR1-004 30519699-30522609 retained_intron
  ENST00000491489 GOSR1-012 30477423-30485134 retained_intron
  ENST00000494918 GOSR1-003 30510593-30522593 retained_intron
  ENST00000537788 GOSR1-011 30477423-30490191 nonsense_mediated_decay
  ENST00000579905 GOSR1-007 30478495-30481342 processed_transcript
  ENST00000581721 GOSR1-014 30477427-30522416 protein_coding
  ENST00000610619 GOSR1-201 30477423-30487558 protein_coding
  ENST00000620049 GOSR1-202 30477423-30522593 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000225724ENST00000414833ENST00000451249ENST00000467337ENST00000467635ENST00000620049
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000225724 1.995±0.00 0.540±0.00 1.511±0.47 0.754±0.00 1.985±0.00 2.574±0.00 1.764±0.00 N/A 2.065±0.00 3.219±1.35 4.001±0.78 2.938±0.37
ENST00000414833 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.055±0.00 6.680±0.00 14.190±0.00
ENST00000451249 N/A N/A N/A N/A N/A 5.248±0.00 3.732±0.00 5.427±0.00 N/A 3.727±0.00 N/A 3.419±0.00
ENST00000467337 N/A 2.556±0.00 4.324±0.00 2.549±0.00 N/A N/A 5.246±0.00 2.575±0.00 N/A N/A 3.281±0.00 N/A
ENST00000467635 N/A 7.603±0.00 11.778±0.00 5.538±0.00 8.009±0.00 N/A N/A N/A 3.706±0.00 10.608±0.00 N/A N/A
ENST00000620049 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.684±0.00 2.795±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0005484 IDA SNAP receptor activity
GO:0005794 IDA Golgi apparatus
GO:0005801 IEA cis-Golgi network
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0006891 TAS intra-Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031201 TAS SNARE complex
GO:0042147 IDA retrograde transport, endosome to Golgi

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026654 gosr1 golgi SNAP receptor complex member 1 protein_coding Danio_rerio
ENSMUSG00000010392 Gosr1 golgi SNAP receptor complex member 1 protein_coding Mus_musculus

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