C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: aldehyde dehydrogenase 3 family, member A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108602 ALDH3A1 9606 - 17:19737984-19748943 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000225740 ALDH3A1-001 19737984-19748433 protein_coding
  ENST00000395555 ALDH3A1-007 19737984-19748341 protein_coding
  ENST00000426645 ALDH3A1-018 19741093-19745133 protein_coding
  ENST00000439102 ALDH3A1-009 19739508-19745680 protein_coding
  ENST00000444455 ALDH3A1-201 19737987-19745612 protein_coding
  ENST00000457500 ALDH3A1-010 19737988-19745459 protein_coding
  ENST00000468746 ALDH3A1-006 19737984-19748341 nonsense_mediated_decay
  ENST00000479677 ALDH3A1-002 19737984-19748364 retained_intron
  ENST00000485231 ALDH3A1-008 19742626-19748298 processed_transcript
  ENST00000485472 ALDH3A1-019 19740371-19743500 retained_intron
  ENST00000487650 ALDH3A1-011 19740175-19741356 retained_intron
  ENST00000494157 ALDH3A1-005 19737984-19748393 protein_coding
  ENST00000570414 ALDH3A1-014 19743402-19748293 protein_coding
  ENST00000573368 ALDH3A1-016 19743267-19745412 protein_coding
  ENST00000574162 ALDH3A1-013 19743232-19748943 protein_coding
  ENST00000575103 ALDH3A1-015 19744822-19745612 retained_intron
  ENST00000575860 ALDH3A1-017 19743031-19745146 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000225740ENST00000395555ENST00000426645ENST00000439102ENST00000444455ENST00000457500ENST00000468746ENST00000485472ENST00000487650ENST00000494157ENST00000573368ENST00000574162ENST00000575103
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000225740 N/A N/A 0.264±0.00 N/A N/A N/A N/A N/A N/A 1.557±0.00 N/A N/A
ENST00000395555 0.911±0.00 N/A N/A N/A N/A N/A 0.137±0.09 4.297±0.00 N/A 0.373±0.27 N/A N/A
ENST00000426645 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.471±0.00 N/A N/A
ENST00000439102 N/A 0.556±0.00 0.086±0.00 2.455±0.00 N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A
ENST00000444455 0.956±0.00 0.605±0.00 N/A N/A N/A N/A N/A 0.862±0.00 0.236±0.00 1.403±0.00 N/A 0.859±0.00
ENST00000457500 2.662±0.00 0.253±0.00 N/A N/A N/A N/A N/A N/A N/A 0.481±0.05 N/A N/A
ENST00000468746 N/A 0.175±0.00 N/A N/A N/A N/A N/A 3.471±0.00 N/A N/A N/A N/A
ENST00000485472 N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.04 N/A
ENST00000494157 1.336±0.00 N/A 0.454±0.00 N/A 0.045±0.00 0.392±0.00 0.132±0.00 N/A N/A N/A N/A 0.404±0.00
ENST00000573368 N/A N/A 0.766±0.00 N/A N/A N/A N/A N/A N/A 1.859±0.00 N/A N/A
ENST00000574162 N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A N/A N/A N/A
ENST00000575103 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.670±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077F CIL_00077F_0002 CGP 17:19737984-19867936

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0004028 IEA 3-chloroallyl aldehyde dehydrogenase activity
GO:0004029 IDA aldehyde dehydrogenase (NAD) activity
GO:0004030 IEA aldehyde dehydrogenase [NAD(P)+] activity
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005829 ISS cytosol
GO:0005886 IDA plasma membrane
GO:0006081 IDA:IEA cellular aldehyde metabolic process
GO:0007568 IEA aging
GO:0007584 IEA response to nutrient
GO:0008106 IDA alcohol dehydrogenase (NADP+) activity
GO:0008152 IEA metabolic process
GO:0008218 IEA bioluminescence
GO:0008284 IEA positive regulation of cell proliferation
GO:0014070 IEA response to organic cyclic compound
GO:0016491 IEA oxidoreductase activity
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0042493 IEA response to drug
GO:0051384 IEA response to glucocorticoid
GO:0051591 IEA response to cAMP
GO:0055114 IEA:IDA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028259 aldh3a2a aldehyde dehydrogenase 3 family, member A2a protein_coding Danio_rerio
ENSDARG00000029381 aldh3a2b aldehyde dehydrogenase 3 family, member A2b protein_coding Danio_rerio
ENSDARG00000074791 aldh3a1 aldehyde dehydrogenase 3 family, member A1 protein_coding Danio_rerio
ENSMUSG00000019102 Aldh3a1 aldehyde dehydrogenase family 3, subfamily A1 protein_coding Mus_musculus

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