C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ABI family, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108798 ABI3 9606 + 17:49210227-49223225 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000225941 ABI3-001 49210227-49223225 protein_coding
  ENST00000419580 ABI3-002 49210411-49223036 protein_coding
  ENST00000571035 ABI3-004 49219858-49223007 protein_coding
  ENST00000573347 ABI3-003 49219563-49222562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000225941ENST00000419580ENST00000571035
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000225941 1.360±0.00 16.449±0.00 1.407±0.00 1.714±0.46 N/A 1.991±0.00 8.877±0.00 1.500±0.98 6.482±0.00 0.414±0.00 3.409±2.89 5.564±2.73 N/A
ENST00000419580 2.536±0.00 8.522±0.00 0.885±0.77 2.573±0.00 1.312±0.00 0.223±0.00 N/A 0.581±0.00 3.347±1.54 0.284±0.12 1.390±0.40 2.319±1.19 1.486±0.00
ENST00000571035 N/A N/A N/A 2.680±0.00 N/A 2.587±0.00 N/A 1.880±0.00 5.165±0.00 0.482±0.00 N/A 3.198±0.00 0.588±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MX CIL_0004MX_0002 CGP 17:49132460-49210574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005622 IDA intracellular
GO:0005737 IDA:IEA cytoplasm
GO:0006928 NAS cellular component movement
GO:0016020 IDA membrane
GO:0030027 IDA lamellipodium
GO:0030334 IDA regulation of cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060072 ABI3 (1 of 2) ABI family, member 3 protein_coding Danio_rerio
ENSDARG00000063283 ABI3 (2 of 2) ABI family, member 3 protein_coding Danio_rerio
ENSMUSG00000018381 Abi3 ABI gene family, member 3 protein_coding Mus_musculus

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