C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: recoverin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109047 RCVRN 9606 - 17:9896320-9905621 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000226193 RCVRN-001 9896320-9905621 protein_coding
  ENST00000570909 RCVRN-002 9897710-9901202 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000226193ENST00000570909
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000226193 N/A 0.010±0.00 0.112±0.02 0.037±0.01 0.172±0.00 0.020±0.00 0.060±0.00 0.017±0.00 N/A 0.039±0.01 0.035±0.00 0.045±0.02
ENST00000570909 0.248±0.00 0.173±0.00 0.500±0.00 N/A 0.349±0.00 0.061±0.00 N/A 0.023±0.00 0.097±0.00 0.276±0.00 0.064±0.02 0.220±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HG CIL_0000HG_0001 CGP 17:9822206-9905621
CIL_0005YU CIL_0005YU_0002 CGP 17:9896320-10198551

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007165 TAS signal transduction
GO:0007601 IEA visual perception
GO:0007602 IEA phototransduction
GO:0007603 TAS phototransduction, visible light
GO:0008048 TAS calcium sensitive guanylate cyclase activator activity
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0030425 IEA dendrite
GO:0031284 TAS positive regulation of guanylate cyclase activity
GO:0051924 IEA regulation of calcium ion transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052223 rcvrna recoverin a protein_coding Danio_rerio
ENSDARG00000059257 RCVRN (2 of 2) recoverin protein_coding Danio_rerio
ENSMUSG00000020907 Rcvrn recoverin protein_coding Mus_musculus

Loading