C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major facilitator superfamily domain containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109736 MFSD10 9606 - 4:2930561-2934859 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329687 MFSD10-010 2930568-2934458 protein_coding
  ENST00000355443 MFSD10-001 2930565-2934859 protein_coding
  ENST00000503596 MFSD10-003 2930583-2934816 nonsense_mediated_decay
  ENST00000507272 MFSD10-006 2930605-2933997 nonsense_mediated_decay
  ENST00000507555 MFSD10-002 2930611-2934834 protein_coding
  ENST00000508221 MFSD10-004 2930603-2934815 protein_coding
  ENST00000508276 MFSD10-008 2931140-2931936 retained_intron
  ENST00000509676 MFSD10-011 2932065-2934796 retained_intron
  ENST00000512781 MFSD10-005 2931227-2932698 retained_intron
  ENST00000514031 MFSD10-009 2930565-2931886 retained_intron
  ENST00000514800 MFSD10-007 2930561-2933947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329687ENST00000355443ENST00000503596ENST00000507272ENST00000507555ENST00000508221ENST00000509676ENST00000512781ENST00000514031ENST00000514800
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329687 N/A 5.657±0.00 N/A 1.500±0.00 N/A N/A N/A N/A 0.305±0.00 N/A N/A N/A N/A N/A
ENST00000355443 6.785±0.00 N/A N/A N/A 4.618±0.00 8.417±0.00 1.586±0.00 0.284±0.00 1.800±0.00 N/A N/A 26.419±10.30 24.191±10.85 N/A
ENST00000503596 8.294±0.00 13.580±0.00 N/A 1.516±0.44 8.175±0.00 11.808±0.00 0.827±0.00 11.822±0.00 0.684±0.00 11.066±10.89 1.513±0.00 5.747±4.94 2.663±0.00 5.520±3.31
ENST00000507272 N/A N/A N/A 0.418±0.00 2.387±1.49 N/A 2.671±0.00 5.345±0.00 0.809±0.00 N/A N/A 0.535±0.00 N/A N/A
ENST00000507555 N/A N/A 1.259±0.00 N/A N/A N/A 2.582±0.00 N/A 0.897±0.00 1.081±0.00 1.283±0.00 8.620±0.00 N/A 3.928±0.73
ENST00000508221 N/A N/A N/A N/A 0.757±0.00 N/A 0.160±0.00 5.135±0.00 N/A N/A 3.119±0.00 N/A N/A N/A
ENST00000509676 N/A N/A N/A 1.460±0.00 N/A N/A N/A N/A N/A N/A 1.259±0.00 7.462±5.13 N/A 2.419±0.00
ENST00000512781 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.622±0.00 N/A N/A 6.325±0.00 N/A
ENST00000514031 N/A N/A N/A 0.892±0.00 N/A N/A N/A N/A 1.345±0.00 N/A 1.766±0.34 N/A N/A N/A
ENST00000514800 5.267±0.00 10.526±0.00 N/A N/A 5.322±0.00 7.680±0.00 1.928±0.00 0.247±0.00 0.478±0.00 11.792±0.00 N/A 11.126±2.98 2.191±0.00 4.787±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056E CIL_00056E_0001 CGP 4:2843857-2934859
CIL_00056S CIL_00056S_0001 CGP 4:2930561-2963385

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006810 TAS transport
GO:0006915 IEA apoptotic process
GO:0008493 TAS tetracycline transporter activity
GO:0015904 TAS tetracycline transport
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086786 mfsd10 major facilitator superfamily domain containing 10 protein_coding Danio_rerio
ENSMUSG00000001082 Mfsd10 major facilitator superfamily domain containing 10 protein_coding Mus_musculus

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