C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box helicase 25
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109832 DDX25 9606 + 11:125903376-125923263 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263576 DDX25-001 125904363-125923110 protein_coding
  ENST00000525943 DDX25-002 125903376-125923083 processed_transcript
  ENST00000526875 DDX25-004 125906069-125923104 protein_coding
  ENST00000530129 DDX25-005 125904669-125910394 protein_coding
  ENST00000530414 DDX25-003 125904509-125922256 protein_coding
  ENST00000531000 DDX25-006 125920958-125923263 retained_intron
  ENST00000532928 DDX25-007 125921219-125922664 retained_intron
  ENST00000584970 DDX25-008 125921189-125922882 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000263576ENST00000525943ENST00000526875ENST00000530129ENST00000530414ENST00000531000ENST00000584970
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000263576 N/A N/A N/A 3.556±0.00 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A 20.805±8.27
ENST00000525943 N/A N/A N/A 2.594±0.00 N/A N/A N/A 0.031±0.00 N/A N/A 0.132±0.05 N/A N/A
ENST00000526875 N/A N/A N/A 5.586±0.00 N/A 0.077±0.02 N/A 0.363±0.00 0.038±0.00 N/A 0.076±0.00 0.116±0.00 24.417±8.96
ENST00000530129 0.179±0.00 N/A N/A N/A N/A 0.120±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000530414 0.050±0.00 0.108±0.00 0.052±0.00 N/A 0.096±0.00 0.030±0.00 0.022±0.00 N/A 0.142±0.00 0.038±0.00 0.042±0.00 N/A N/A
ENST00000531000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.02 N/A N/A
ENST00000584970 N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0001 VISTA 11:125757160-126360423

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0004004 ISS ATP-dependent RNA helicase activity
GO:0004386 IEA helicase activity
GO:0005524 ISS:IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0006406 ISS mRNA export from nucleus
GO:0006417 ISS regulation of translation
GO:0007275 IEA multicellular organismal development
GO:0007286 ISS spermatid development
GO:0008152 IEA metabolic process
GO:0033391 ISS chromatoid body

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000032101 Ddx25 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 protein_coding Mus_musculus

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