C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: elongator acetyltransferase complex subunit 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109911 ELP4 9606 + 11:31509750-31783998 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000350638 ELP4-001 31509750-31783998 protein_coding
  ENST00000379163 ELP4-004 31509770-31783771 protein_coding
  ENST00000395934 ELP4-003 31509778-31783775 protein_coding
  ENST00000474374 ELP4-002 31509771-31650221 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000350638ENST00000379163ENST00000395934ENST00000474374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000350638 1.339±0.00 0.516±0.00 N/A 3.159±1.19 1.039±0.00 2.000±0.00 1.575±0.59 1.326±0.97 1.174±0.31 0.942±0.47 1.046±0.30 2.254±0.97 2.798±0.49 2.174±0.39
ENST00000379163 N/A N/A 0.401±0.00 N/A N/A N/A 0.494±0.03 2.157±0.00 1.452±0.00 N/A N/A 1.109±0.00 N/A 0.417±0.00
ENST00000395934 0.649±0.00 1.882±0.00 N/A N/A 0.979±0.00 0.649±0.00 N/A 1.064±0.00 N/A 0.849±0.00 0.483±0.00 0.345±0.00 0.521±0.00 0.733±0.12
ENST00000474374 N/A N/A 1.172±0.00 2.757±0.00 2.490±0.00 2.159±1.31 N/A 1.633±0.00 2.497±0.00 2.921±0.00 0.365±0.00 1.935±0.00 1.500±0.07 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JA CIL_0007JA_0001 UCNEbase 11:30717111-31639896
CIL_00096G CIL_00096G_0001 VISTA 11:31180488-31781610
CIL_0008KI CIL_0008KI_0001 VISTA 11:31301275-31902571
CIL_0007UQ CIL_0007UQ_0001 VISTA 11:31363809-31965336
CIL_0008UP CIL_0008UP_0001 VISTA 11:31463875-32065678
CIL_0007XG CIL_0007XG_0001 VISTA 11:31494904-32096873

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004402 IDA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006325 TAS chromatin organization
GO:0006357 TAS:IEA regulation of transcription from RNA polymerase II promoter
GO:0006368 IC transcription elongation from RNA polymerase II promoter
GO:0008023 IDA transcription elongation factor complex
GO:0008607 IDA phosphorylase kinase regulator activity
GO:0016573 IDA histone acetylation
GO:0016591 IDA DNA-directed RNA polymerase II, holoenzyme
GO:0033588 IDA:IEA Elongator holoenzyme complex
GO:0045859 IDA regulation of protein kinase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008852 elp4 elongation protein 4 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000027167 Elp4 elongation protein 4 homolog (S. cerevisiae) protein_coding Mus_musculus

Loading