C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 6, regulatory subunit 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110075 PPP6R3 9606 + 11:68460731-68615334 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265636 PPP6R3-003 68460813-68615252 protein_coding
  ENST00000265637 PPP6R3-021 68460752-68615334 protein_coding
  ENST00000393800 PPP6R3-001 68460731-68615334 protein_coding
  ENST00000393801 PPP6R3-005 68460770-68615331 protein_coding
  ENST00000524845 PPP6R3-026 68460749-68613117 protein_coding
  ENST00000524904 PPP6R3-007 68460755-68614575 protein_coding
  ENST00000525050 PPP6R3-015 68519563-68551219 retained_intron
  ENST00000525152 PPP6R3-024 68609775-68613398 retained_intron
  ENST00000525421 PPP6R3-022 68571099-68596218 nonsense_mediated_decay
  ENST00000526307 PPP6R3-006 68586276-68614592 retained_intron
  ENST00000526574 PPP6R3-019 68564424-68571216 retained_intron
  ENST00000526593 PPP6R3-023 68601886-68613124 nonsense_mediated_decay
  ENST00000527069 PPP6R3-014 68519635-68551220 retained_intron
  ENST00000527403 PPP6R3-020 68519506-68615310 protein_coding
  ENST00000528635 PPP6R3-012 68460738-68537689 protein_coding
  ENST00000529172 PPP6R3-016 68537816-68551219 retained_intron
  ENST00000529344 PPP6R3-011 68460748-68537891 protein_coding
  ENST00000529710 PPP6R3-004 68460813-68615252 protein_coding
  ENST00000529907 PPP6R3-009 68460747-68554220 protein_coding
  ENST00000530427 PPP6R3-010 68460731-68537669 processed_transcript
  ENST00000530734 PPP6R3-025 68609951-68613538 protein_coding
  ENST00000531244 PPP6R3-013 68535411-68551127 protein_coding
  ENST00000531432 PPP6R3-017 68558196-68564407 retained_intron
  ENST00000533127 PPP6R3-027 68460747-68537781 protein_coding
  ENST00000534190 PPP6R3-018 68558642-68613354 protein_coding
  ENST00000534534 PPP6R3-008 68460748-68613882 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265637ENST00000393800ENST00000524845ENST00000524904ENST00000527403ENST00000529710ENST00000534190
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265637 N/A 1.674±0.00 N/A N/A N/A 1.682±0.00 N/A N/A 1.564±0.00 N/A 1.864±0.00 5.221±2.69 2.927±0.00 7.770±0.00
ENST00000393800 6.852±0.00 3.187±0.00 2.917±0.00 2.339±0.00 6.995±0.59 3.563±1.01 2.910±0.00 2.583±0.00 3.614±2.75 4.489±1.92 5.167±0.00 5.937±2.50 2.572±0.00 N/A
ENST00000524845 N/A N/A 3.994±0.00 4.909±0.00 N/A 5.501±0.00 5.328±0.00 7.124±0.00 9.839±0.00 12.425±0.00 1.693±0.00 12.300±0.00 N/A N/A
ENST00000524904 N/A N/A N/A N/A N/A 2.602±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527403 N/A N/A N/A 2.233±0.52 N/A N/A 4.603±0.00 N/A N/A N/A N/A N/A N/A 4.531±0.00
ENST00000529710 N/A 3.491±0.00 N/A N/A N/A N/A N/A N/A N/A 2.879±0.00 2.423±0.00 4.068±0.00 5.015±0.00 7.169±0.00
ENST00000534190 5.003±0.00 N/A 5.174±0.00 N/A N/A N/A N/A N/A N/A 4.054±0.00 N/A 7.331±0.00 4.663±0.00 16.150±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0019903 IPI protein phosphatase binding
GO:0043666 IDA regulation of phosphoprotein phosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013379 ppp6r3 protein phosphatase 6, regulatory subunit 3 protein_coding Danio_rerio
ENSMUSG00000024908 Ppp6r3 protein phosphatase 6, regulatory subunit 3 protein_coding Mus_musculus

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