C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cysteine-serine-rich nuclear protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110925 CSRNP2 9606 - 12:51061205-51083664 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000228515 CSRNP2-001 51061205-51083550 protein_coding
  ENST00000546935 CSRNP2-004 51074058-51083583 protein_coding
  ENST00000548206 CSRNP2-006 51067899-51083582 protein_coding
  ENST00000548981 CSRNP2-003 51073890-51083643 protein_coding
  ENST00000550461 CSRNP2-005 51076569-51083596 processed_transcript
  ENST00000550533 CSRNP2-008 51073928-51076835 retained_intron
  ENST00000552680 CSRNP2-002 51076416-51083664 processed_transcript
  ENST00000552899 CSRNP2-007 51073975-51083110 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000228515ENST00000548206
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000228515 2.751±0.00 9.089±0.00 2.456±0.00 1.589±0.67 2.573±2.19 4.335±0.00 1.930±0.82 6.670±0.00 1.217±0.63 4.770±3.01 4.907±0.91 24.167±7.33
ENST00000548206 N/A N/A N/A N/A N/A 3.427±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B3 CIL_0007B3_0001 CGP 12:51047962-51083664
CIL_00033J CIL_00033J_0002 CGP 12:51061205-51173134

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001228 IEA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0010923 IDA negative regulation of phosphatase activity
GO:0019902 IDA phosphatase binding
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075972 csrnp2 cysteine-serine-rich nuclear protein 2 protein_coding Danio_rerio
ENSMUSG00000044636 Csrnp2 cysteine-serine-rich nuclear protein 2 protein_coding Mus_musculus

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