C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptotagmin X
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110975 SYT10 9606 - 12:33374238-33439819 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000228567 SYT10-001 33374238-33439819 protein_coding
  ENST00000539102 SYT10-002 33376273-33439646 nonsense_mediated_decay
  ENST00000567656 SYT10-003 33407798-33426160 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000228567ENST00000539102ENST00000567656
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000228567 N/A N/A 0.018±0.00 0.159±0.00 N/A 0.445±0.00 0.013±0.00 N/A N/A N/A N/A
ENST00000539102 0.031±0.00 0.073±0.00 0.025±0.00 0.049±0.00 0.008±0.00 N/A 0.019±0.00 0.097±0.00 0.033±0.00 0.017±0.00 0.129±0.09
ENST00000567656 0.149±0.00 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HN CIL_0006HN_0001 CGP 12:33374238-34029694

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0008021 IEA synaptic vesicle
GO:0016021 IEA integral component of membrane
GO:0017158 IEA regulation of calcium ion-dependent exocytosis
GO:0030054 IEA cell junction
GO:0042802 IEA identical protein binding
GO:0042803 IEA protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045750 syt10 synaptotagmin X protein_coding Danio_rerio
ENSMUSG00000063260 Syt10 synaptotagmin X protein_coding Mus_musculus

Loading