C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: arginine/serine-rich coiled-coil 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111011 RSRC2 9606 - 12:122503458-122527000 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331738 RSRC2-001 122503458-122526999 protein_coding
  ENST00000344591 RSRC2-013 122508367-122526960 protein_coding
  ENST00000392442 RSRC2-020 122505330-122513917 processed_transcript
  ENST00000433877 RSRC2-019 122505059-122526936 nonsense_mediated_decay
  ENST00000524399 RSRC2-018 122514773-122517396 retained_intron
  ENST00000525332 RSRC2-014 122505380-122508406 processed_transcript
  ENST00000525335 RSRC2-010 122508250-122526949 retained_intron
  ENST00000525387 RSRC2-009 122519910-122526954 retained_intron
  ENST00000525570 RSRC2-007 122520978-122526949 retained_intron
  ENST00000526560 RSRC2-011 122517236-122526962 protein_coding
  ENST00000527173 RSRC2-003 122505306-122523756 retained_intron
  ENST00000527399 RSRC2-004 122511111-122526995 nonsense_mediated_decay
  ENST00000527461 RSRC2-008 122518840-122526959 processed_transcript
  ENST00000527796 RSRC2-005 122515163-122526987 retained_intron
  ENST00000528263 RSRC2-012 122508378-122519028 nonsense_mediated_decay
  ENST00000528279 RSRC2-006 122520546-122526940 protein_coding
  ENST00000531389 RSRC2-015 122506372-122508366 retained_intron
  ENST00000531639 RSRC2-017 122518930-122522442 retained_intron
  ENST00000532186 RSRC2-016 122519443-122522291 processed_transcript
  ENST00000532695 RSRC2-002 122505059-122527000 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331738ENST00000392442ENST00000433877ENST00000525335ENST00000526560ENST00000527173ENST00000527796ENST00000528263ENST00000531389ENST00000532695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331738 2.374±0.00 N/A 1.178±0.00 3.053±0.00 3.132±1.06 1.977±0.00 1.497±0.64 4.728±0.00 1.190±0.00 N/A N/A 2.599±0.58 2.392±0.00 4.519±0.00
ENST00000392442 N/A 15.981±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00 15.618±0.00 8.009±7.40 23.792±18.26
ENST00000525335 N/A N/A 1.554±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.321±0.00
ENST00000526560 26.439±0.00 N/A N/A 32.687±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.366±0.00
ENST00000527173 N/A N/A 0.986±0.00 N/A N/A N/A N/A N/A N/A N/A 0.260±0.00 N/A N/A N/A
ENST00000527796 N/A 3.746±0.00 1.430±0.00 2.179±0.00 4.676±0.00 3.246±0.00 0.923±0.00 0.911±0.00 N/A 7.623±0.00 N/A 3.409±0.00 N/A N/A
ENST00000528263 N/A N/A N/A N/A N/A N/A N/A N/A 6.071±0.00 N/A N/A N/A N/A N/A
ENST00000531389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.011±0.00 N/A N/A N/A
ENST00000532695 9.830±0.00 14.124±0.00 1.734±0.00 14.834±0.00 8.160±3.96 7.291±4.35 10.243±0.00 2.886±0.00 3.323±0.36 N/A 0.169±0.00 6.508±2.63 5.616±0.79 16.063±1.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PD CIL_0002PD_0001 CGP 12:122472870-122527000
CIL_0002PE CIL_0002PE_0001 CGP 12:122503458-122626396

Gene Ontology
GO IDEvidence TypeGO Description
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042534 rsrc2 arginine/serine-rich coiled-coil 2 protein_coding Danio_rerio
ENSMUSG00000029422 Rsrc2 arginine/serine-rich coiled-coil 2 protein_coding Mus_musculus

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