C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell division cycle associated 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111665 CDCA3 9606 - 12:6844793-6852066 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000229265 CDCA3-006 6848816-6851252 protein_coding
  ENST00000422785 CDCA3-011 6844793-6851269 protein_coding
  ENST00000446553 CDCA3-003 6850199-6851292 retained_intron
  ENST00000535406 CDCA3-004 6848829-6851258 protein_coding
  ENST00000535871 CDCA3-008 6849154-6850490 processed_transcript
  ENST00000536241 CDCA3-002 6848829-6851262 retained_intron
  ENST00000538862 CDCA3-010 6848809-6852066 protein_coding
  ENST00000540683 CDCA3-007 6848843-6851249 protein_coding
  ENST00000544610 CDCA3-009 6848832-6849807 processed_transcript
  ENST00000545368 CDCA3-005 6849075-6851292 processed_transcript
  ENST00000603043 CDCA3-012 6844859-6848367 processed_transcript
  ENST00000604599 CDCA3-013 6844799-6848872 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000229265ENST00000422785ENST00000535406ENST00000535871ENST00000536241ENST00000538862ENST00000540683ENST00000544610ENST00000545368ENST00000603043ENST00000604599
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000229265 N/A N/A N/A N/A 0.477±0.00 N/A N/A N/A N/A N/A 10.041±4.02 3.809±0.68 N/A
ENST00000422785 N/A N/A 0.439±0.00 N/A 0.112±0.00 N/A N/A N/A N/A N/A 1.483±0.56 N/A N/A
ENST00000535406 0.139±0.00 N/A 0.087±0.00 N/A 0.498±0.00 N/A N/A N/A N/A N/A 1.004±0.00 N/A 6.173±0.00
ENST00000535871 N/A N/A N/A N/A N/A N/A 1.855±0.00 N/A N/A N/A N/A N/A N/A
ENST00000536241 N/A N/A N/A 0.181±0.00 0.211±0.00 N/A N/A N/A N/A N/A 0.552±0.00 N/A N/A
ENST00000538862 0.228±0.00 N/A N/A N/A N/A N/A N/A 0.161±0.00 N/A N/A 1.211±0.00 0.967±0.00 20.187±9.49
ENST00000540683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.428±0.00 4.184±2.01 N/A
ENST00000544610 N/A N/A N/A 0.275±0.00 1.314±0.00 N/A N/A 0.290±0.00 N/A N/A N/A N/A N/A
ENST00000545368 N/A N/A N/A 1.429±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603043 0.179±0.00 0.939±0.00 0.342±0.32 0.288±0.00 0.305±0.00 N/A N/A 0.066±0.00 0.594±0.25 0.099±0.00 6.836±0.00 N/A N/A
ENST00000604599 N/A N/A N/A 0.179±0.02 N/A 0.010±0.00 N/A N/A N/A N/A 0.876±0.37 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XS CIL_0003XS_0002 CGP 12:6828410-6847393

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0007067 IEA mitotic nuclear division
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000023505 Cdca3 cell division cycle associated 3 protein_coding Mus_musculus

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