C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vanin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112303 VNN2 9606 - 6:132743870-132763459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326499 VNN2-001 132743870-132758008 protein_coding
  ENST00000392389 VNN2-003 132744026-132757970 nonsense_mediated_decay
  ENST00000418593 VNN2-010 132743870-132757883 nonsense_mediated_decay
  ENST00000422400 VNN2-009 132743895-132757883 nonsense_mediated_decay
  ENST00000524919 VNN2-011 132755882-132763459 protein_coding
  ENST00000525270 VNN2-002 132744196-132763447 protein_coding
  ENST00000525289 VNN2-006 132744300-132757883 protein_coding
  ENST00000525674 VNN2-005 132744300-132757883 nonsense_mediated_decay
  ENST00000526157 VNN2-016 132752724-132757904 processed_transcript
  ENST00000526192 VNN2-015 132753453-132757873 processed_transcript
  ENST00000528801 VNN2-008 132744300-132757883 nonsense_mediated_decay
  ENST00000530536 VNN2-012 132755914-132763455 protein_coding
  ENST00000531279 VNN2-014 132752714-132763430 nonsense_mediated_decay
  ENST00000532012 VNN2-013 132757457-132763431 protein_coding
  ENST00000532053 VNN2-007 132744300-132757883 nonsense_mediated_decay
  ENST00000533835 VNN2-004 132749749-132757904 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326499ENST00000418593ENST00000422400ENST00000524919ENST00000525270ENST00000526157ENST00000526192ENST00000528801ENST00000532012ENST00000532053ENST00000533835
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326499 N/A N/A N/A N/A N/A 0.217±0.00 N/A N/A 0.139±0.00 2.943±0.00 N/A 0.379±0.25 1.158±0.72 N/A
ENST00000418593 N/A N/A N/A N/A 0.218±0.00 N/A N/A N/A N/A N/A N/A N/A 2.035±0.22 N/A
ENST00000422400 1.688±0.00 0.885±0.00 N/A N/A 0.227±0.15 0.396±0.00 0.182±0.00 N/A 0.900±0.00 16.139±0.00 N/A N/A 0.509±0.00 0.288±0.00
ENST00000524919 N/A N/A N/A 0.077±0.00 1.867±0.00 2.701±0.00 0.996±0.00 4.703±0.00 0.560±0.00 22.162±0.00 2.787±0.00 2.111±0.00 N/A N/A
ENST00000525270 2.491±0.00 2.511±0.00 N/A N/A N/A N/A N/A 0.824±0.00 N/A 13.393±0.00 N/A 0.572±0.00 1.149±0.00 N/A
ENST00000526157 N/A N/A N/A N/A N/A 0.797±0.00 N/A N/A N/A 18.944±0.00 N/A 0.312±0.00 N/A N/A
ENST00000526192 N/A N/A 2.217±0.00 N/A 0.559±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528801 N/A N/A N/A N/A N/A N/A 0.571±0.00 N/A 1.514±0.00 N/A N/A N/A N/A N/A
ENST00000532012 N/A N/A 0.585±0.00 N/A N/A N/A N/A N/A 0.733±0.00 N/A N/A N/A N/A N/A
ENST00000532053 N/A N/A N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A 0.023±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0006807 IEA nitrogen compound metabolic process
GO:0006928 TAS cellular component movement
GO:0015939 IDA pantothenate metabolic process
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016811 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
GO:0017159 IDA pantetheine hydrolase activity
GO:0031225 IEA anchored component of membrane

Homologs

No Homologs available.

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