C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HBS1-like translational GTPase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112339 HBS1L 9606 - 6:134960378-135103056 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314674 HBS1L-003 135002621-135054803 protein_coding
  ENST00000367820 HBS1L-014 135036696-135054800 protein_coding
  ENST00000367822 HBS1L-004 135035857-135054884 protein_coding
  ENST00000367826 HBS1L-006 134964633-135054819 protein_coding
  ENST00000367837 HBS1L-001 134960378-135054898 protein_coding
  ENST00000415177 HBS1L-007 134964631-135054819 protein_coding
  ENST00000524715 HBS1L-013 135002782-135054817 protein_coding
  ENST00000525067 HBS1L-012 135037849-135054852 protein_coding
  ENST00000526100 HBS1L-008 134965149-135050644 nonsense_mediated_decay
  ENST00000527005 HBS1L-005 134964629-134983573 retained_intron
  ENST00000527507 HBS1L-015 134996822-135027195 protein_coding
  ENST00000527578 HBS1L-010 134964629-135027196 protein_coding
  ENST00000529169 HBS1L-017 134982293-134987745 protein_coding
  ENST00000529641 HBS1L-016 134987654-135027156 protein_coding
  ENST00000529882 HBS1L-011 135002815-135103056 protein_coding
  ENST00000533274 HBS1L-009 134964842-135050621 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367820ENST00000367822ENST00000367826ENST00000367837ENST00000415177ENST00000524715ENST00000526100ENST00000527578ENST00000529641ENST00000533274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367820 N/A N/A 5.880±0.00 N/A 6.889±0.00 N/A N/A 12.054±0.00 N/A N/A N/A 30.853±0.00 N/A N/A
ENST00000367822 N/A N/A N/A N/A N/A 1.822±0.00 1.279±0.00 N/A N/A 2.267±0.00 N/A 7.399±0.00 N/A N/A
ENST00000367826 5.065±0.00 4.873±0.00 0.872±0.00 6.926±0.32 4.828±1.20 3.243±1.46 4.901±2.01 3.570±0.95 4.500±0.94 3.315±0.20 9.340±6.68 7.809±2.73 5.115±0.67 5.785±2.52
ENST00000367837 N/A N/A N/A N/A 0.646±0.00 N/A N/A N/A 1.651±0.00 0.644±0.00 N/A N/A N/A N/A
ENST00000415177 1.839±0.00 N/A N/A N/A 2.800±0.00 N/A N/A 3.604±0.00 2.401±0.00 1.829±0.00 2.781±0.00 N/A N/A N/A
ENST00000524715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.868±0.00 15.533±0.00 14.191±0.00
ENST00000526100 3.416±0.00 N/A 1.916±0.00 8.216±0.00 N/A 2.596±0.61 5.473±0.00 4.261±0.00 3.740±0.00 2.485±0.00 6.717±4.21 22.979±0.00 9.060±0.00 7.709±2.78
ENST00000527578 N/A N/A N/A 4.262±0.44 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529641 N/A N/A 5.043±0.00 13.432±0.75 N/A N/A 5.541±0.00 6.127±0.00 8.478±0.00 5.845±0.00 5.757±0.00 35.229±0.00 15.893±0.00 18.465±0.00
ENST00000533274 2.379±0.00 7.673±0.00 N/A 9.232±0.00 4.504±0.00 6.254±0.00 5.478±0.00 3.643±1.18 1.995±0.00 2.025±0.00 8.937±0.00 5.532±0.00 2.411±0.12 5.112±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014Q CIL_00014Q_0002 CGP 6:134917390-135103056
CIL_00014P CIL_00014P_0002 CGP 6:134960378-135219173

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0006412 TAS translation
GO:0006414 IEA translational elongation
GO:0007165 TAS signal transduction
GO:0016020 IDA membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036778 hbs1l HBS1-like (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000019977 Hbs1l Hbs1-like (S. cerevisiae) protein_coding Mus_musculus

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