C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 22 (organic cation transporter), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112499 SLC22A2 9606 - 6:160171061-160277638 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366952 SLC22A2-003 160244185-160277638 protein_coding
  ENST00000366953 SLC22A2-001 160216762-160259016 protein_coding
  ENST00000486916 SLC22A2-002 160171061-160245541 processed_transcript
  ENST00000489644 SLC22A2-005 160257750-160258739 processed_transcript
  ENST00000491092 SLC22A2-004 160217453-160258758 processed_transcript
  ENST00000498556 SLC22A2-007 160217014-160218284 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366952ENST00000366953ENST00000486916ENST00000489644ENST00000491092ENST00000498556
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366952 0.004±0.00 N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A 0.029±0.01 0.011±0.00 0.003±0.00 N/A 0.010±0.00
ENST00000366953 N/A N/A 17.869±0.00 0.094±0.05 0.020±0.00 N/A N/A 8.920±0.00 0.070±0.00 N/A N/A 0.064±0.00 0.489±0.14 N/A
ENST00000486916 N/A N/A N/A N/A 0.324±0.00 N/A N/A 0.281±0.00 0.083±0.00 0.667±0.00 0.083±0.00 0.052±0.00 0.273±0.00 N/A
ENST00000489644 N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000491092 N/A N/A 10.547±0.00 0.117±0.00 N/A 0.068±0.00 0.129±0.00 N/A N/A N/A N/A N/A 0.129±0.00 0.061±0.00
ENST00000498556 N/A 0.178±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.02 N/A 0.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0001 VISTA 6:159654795-160257694

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005496 IEA steroid binding
GO:0005886 TAS plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0006812 IEA cation transport
GO:0006855 TAS drug transmembrane transport
GO:0007268 TAS synaptic transmission
GO:0007269 TAS neurotransmitter secretion
GO:0007589 TAS body fluid secretion
GO:0015075 IEA ion transmembrane transporter activity
GO:0015101 IDA organic cation transmembrane transporter activity
GO:0015220 IEA choline transmembrane transporter activity
GO:0015651 IEA quaternary ammonium group transmembrane transporter activity
GO:0015695 IDA organic cation transport
GO:0015697 IEA quaternary ammonium group transport
GO:0015871 IEA choline transport
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0022857 IEA transmembrane transporter activity
GO:0034220 IEA ion transmembrane transport
GO:0042136 TAS neurotransmitter biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0051608 IEA histamine transport
GO:0055085 IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030530 slc22a2 solute carrier family 22 (organic cation transporter), member 2 protein_coding Danio_rerio
ENSMUSG00000040966 Slc22a2 solute carrier family 22 (organic cation transporter), member 2 protein_coding Mus_musculus

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