C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interphotoreceptor matrix proteoglycan 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112706 IMPG1 9606 - 6:75921115-76072678 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369950 IMPG1-001 75921115-76072678 protein_coding
  ENST00000369952 IMPG1-002 75921731-75935049 protein_coding
  ENST00000369963 IMPG1-201 75921115-76072678 protein_coding
  ENST00000611179 IMPG1-202 75921115-76072678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLiverLungOvaryPlacentaTestisENST00000369952ENST00000611179
Transcript ID Adipose Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000369952 0.023±0.00 0.575±0.00 N/A 0.387±0.00 0.082±0.00 0.062±0.00 0.055±0.00 0.030±0.00 0.118±0.01
ENST00000611179 0.005±0.00 N/A 0.039±0.02 N/A N/A N/A 0.011±0.00 0.021±0.01 0.025±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PV CIL_0006PV_0001 CGP 6:75749192-76072678
CIL_0006PU CIL_0006PU_0001 CGP 6:75921115-77463464

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 TAS extracellular matrix structural constituent
GO:0005515 IEA protein binding
GO:0005578 TAS proteinaceous extracellular matrix
GO:0007601 TAS visual perception

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074839 impg1b interphotoreceptor matrix proteoglycan 1b protein_coding Danio_rerio
ENSDARG00000077187 impg1a interphotoreceptor matrix proteoglycan 1a protein_coding Danio_rerio
ENSMUSG00000032343 Impg1 interphotoreceptor matrix proteoglycan 1 protein_coding Mus_musculus

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