C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chloride intracellular channel 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112782 CLIC5 9606 - 6:45898451-46080395 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000185206 CLIC5-002 45898451-46080395 protein_coding
  ENST00000339561 CLIC5-003 45901761-46015849 protein_coding
  ENST00000464137 CLIC5-007 46014283-46015546 processed_transcript
  ENST00000476852 CLIC5-006 45932694-45937464 processed_transcript
  ENST00000484572 CLIC5-004 45903066-45920714 processed_transcript
  ENST00000486570 CLIC5-005 45914245-45937597 processed_transcript
  ENST00000487396 CLIC5-001 45900308-45903179 processed_transcript
  ENST00000544153 CLIC5-201 45911624-46015889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000185206ENST00000339561ENST00000484572ENST00000544153
Transcript ID Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000185206 0.113±0.00 0.966±0.00 N/A N/A N/A 0.028±0.00 0.157±0.00 N/A 0.360±0.00
ENST00000339561 N/A N/A 1.602±0.00 4.899±0.00 0.027±0.00 0.627±0.00 0.887±0.00 N/A N/A
ENST00000484572 N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A 1.627±0.00
ENST00000544153 N/A N/A N/A N/A N/A N/A N/A 2.514±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008A CIL_00008A_0003 CGP 6:45328157-46080395
CIL_0007VA CIL_0007VA_0001 VISTA 6:45579564-46182817
CIL_0008YF CIL_0008YF_0001 VISTA 6:45752763-46354264
CIL_00008G CIL_00008G_0002 CGP 6:45898451-46146699

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002021 IEA response to dietary excess
GO:0002024 IEA diet induced thermogenesis
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005254 IEA chloride channel activity
GO:0005515 IPI protein binding
GO:0005794 IEA Golgi apparatus
GO:0006810 NAS transport
GO:0006821 IDA chloride transport
GO:0007565 TAS female pregnancy
GO:0007605 IEA sensory perception of sound
GO:0008104 IEA protein localization
GO:0015629 IDA actin cytoskeleton
GO:0032420 IEA stereocilium
GO:0032421 IEA stereocilium bundle
GO:0034707 IEA chloride channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0044070 IEA regulation of anion transport
GO:0050885 IEA neuromuscular process controlling balance
GO:0060088 IEA auditory receptor cell stereocilium organization
GO:0070062 IDA extracellular vesicular exosome
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070584 clic5b chloride intracellular channel 5b protein_coding Danio_rerio
ENSDARG00000075993 clic5a chloride intracellular channel 5a protein_coding Danio_rerio
ENSDARG00000077625 clic5b chloride intracellular channel 5b protein_coding Danio_rerio
ENSMUSG00000023959 Clic5 chloride intracellular channel 5 protein_coding Mus_musculus

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