C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protease, serine, 16 (thymus)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112812 PRSS16 9606 + 6:27247701-27256624 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000230582 PRSS16-001 27247723-27256471 protein_coding
  ENST00000377456 PRSS16-008 27251588-27256456 processed_transcript
  ENST00000421826 PRSS16-002 27247701-27256453 protein_coding
  ENST00000454665 PRSS16-003 27247701-27255868 nonsense_mediated_decay
  ENST00000459736 PRSS16-018 27251322-27255346 processed_transcript
  ENST00000462664 PRSS16-015 27251213-27252270 retained_intron
  ENST00000466364 PRSS16-011 27247731-27255119 nonsense_mediated_decay
  ENST00000468138 PRSS16-020 27251620-27255319 processed_transcript
  ENST00000468930 PRSS16-010 27247731-27254736 nonsense_mediated_decay
  ENST00000470870 PRSS16-005 27247731-27254699 nonsense_mediated_decay
  ENST00000471463 PRSS16-021 27251662-27255381 processed_transcript
  ENST00000475106 PRSS16-007 27248936-27254699 protein_coding
  ENST00000478690 PRSS16-019 27251322-27255653 processed_transcript
  ENST00000481125 PRSS16-014 27251202-27255514 retained_intron
  ENST00000484493 PRSS16-017 27251299-27255571 processed_transcript
  ENST00000485603 PRSS16-009 27252986-27256624 retained_intron
  ENST00000485993 PRSS16-006 27248936-27254699 protein_coding
  ENST00000488649 PRSS16-013 27251194-27255662 retained_intron
  ENST00000492575 PRSS16-016 27251213-27255908 retained_intron
  ENST00000495683 PRSS16-012 27251071-27255820 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000230582ENST00000377456ENST00000421826ENST00000459736ENST00000462664ENST00000466364ENST00000468138ENST00000481125ENST00000485603ENST00000492575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000230582 N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A N/A N/A N/A N/A
ENST00000377456 0.102±0.00 0.183±0.00 0.683±0.00 0.391±0.05 1.408±0.00 0.328±0.13 0.774±0.67 N/A 1.521±0.00 3.066±3.56 5.826±3.96 1.134±0.18
ENST00000421826 N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A N/A
ENST00000459736 N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A
ENST00000462664 N/A N/A N/A N/A 1.255±0.00 0.607±0.00 N/A N/A N/A N/A N/A N/A
ENST00000466364 N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A
ENST00000468138 N/A N/A N/A N/A N/A 0.649±0.00 1.930±0.00 N/A N/A N/A 2.726±0.00 1.485±0.00
ENST00000481125 N/A 0.204±0.00 N/A N/A N/A N/A N/A N/A 1.178±0.34 N/A N/A N/A
ENST00000485603 N/A 0.048±0.00 N/A 0.194±0.00 N/A 0.036±0.00 0.244±0.00 N/A 0.250±0.00 0.307±0.00 N/A 0.175±0.00
ENST00000492575 N/A N/A N/A N/A N/A 0.249±0.00 N/A N/A N/A N/A N/A 0.682±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096D CIL_00096D_0001 VISTA 6:27032592-27634418

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005764 IDA lysosome
GO:0005768 IDA endosome
GO:0006508 IEA proteolysis
GO:0008236 NAS:IEA serine-type peptidase activity
GO:0030163 NAS protein catabolic process
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076602 prss16 protease, serine, 16 (thymus) protein_coding Danio_rerio
ENSMUSG00000006179 Prss16 protease, serine 16 (thymus) protein_coding Mus_musculus

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