C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysyl oxidase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113083 LOX 9606 - 5:122063195-122078285 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000231004 LOX-001 122063195-122078285 protein_coding
  ENST00000503759 LOX-003 122065945-122077223 retained_intron
  ENST00000505593 LOX-005 122065944-122076083 processed_transcript
  ENST00000508067 LOX-006 122070520-122077472 nonsense_mediated_decay
  ENST00000513319 LOX-002 122065797-122077174 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000231004ENST00000503759
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000231004 15.429±0.00 1.061±0.00 0.609±0.00 15.581±0.00 6.569±0.00 1.385±0.00 3.536±0.00 0.528±0.32 4.677±3.98 0.321±0.00 1.850±1.55 1.781±0.55 1.535±1.14
ENST00000503759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.946±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B3 CIL_0004B3_0001 CGP 5:121851955-122075570
CIL_0004B2 CIL_0004B2_0001 CGP 5:121961961-122078285
CIL_0004B1 CIL_0004B1_0001 CGP 5:122063195-122179617

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001568 IEA blood vessel development
GO:0004720 IEA protein-lysine 6-oxidase activity
GO:0005507 IEA copper ion binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005581 IEA collagen trimer
GO:0005634 IEA nucleus
GO:0006464 TAS cellular protein modification process
GO:0009725 IEA response to hormone
GO:0016641 IEA oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
GO:0030198 TAS extracellular matrix organization
GO:0030199 IEA collagen fibril organization
GO:0030324 IEA lung development
GO:0042060 IEA wound healing
GO:0042493 IEA response to drug
GO:0048251 IEA elastic fiber assembly
GO:0048545 IEA response to steroid hormone
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003259 lox lysyl oxidase protein_coding Danio_rerio
ENSDARG00000028412 LOX (2 of 2) lysyl oxidase protein_coding Danio_rerio
ENSMUSG00000024529 Lox lysyl oxidase protein_coding Mus_musculus

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