C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 27 (fatty acid transporter), member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113396 SLC27A6 9606 + 5:128538013-129033642 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262462 SLC27A6-001 128965128-129033631 protein_coding
  ENST00000395266 SLC27A6-003 128965517-129033642 protein_coding
  ENST00000506176 SLC27A6-004 128965528-129033282 protein_coding
  ENST00000508645 SLC27A6-002 128538013-129015944 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000262462ENST00000395266ENST00000506176ENST00000508645
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000262462 0.036±0.00 N/A N/A 0.433±0.00 N/A 2.749±0.54 N/A N/A N/A 2.339±0.01 N/A
ENST00000395266 N/A 0.103±0.00 0.508±0.00 0.220±0.00 0.159±0.00 3.366±0.78 N/A N/A N/A 1.303±0.06 N/A
ENST00000506176 0.103±0.00 0.173±0.00 0.472±0.00 0.403±0.18 N/A 6.266±0.51 0.169±0.00 0.056±0.00 0.051±0.00 0.926±0.00 2.974±1.15
ENST00000508645 N/A N/A N/A N/A N/A N/A N/A 0.388±0.04 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041L CIL_00041L_0001 CGP 5:128083766-128659185
CIL_00041M CIL_00041M_0001 CGP 5:128257909-129033642
CIL_0006CX CIL_0006CX_0002 CGP 5:128538013-129114028

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000038 TAS very long-chain fatty acid metabolic process
GO:0000166 IEA nucleotide binding
GO:0001676 TAS long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004467 TAS long-chain fatty acid-CoA ligase activity
GO:0005886 TAS plasma membrane
GO:0008152 IEA metabolic process
GO:0015909 TAS long-chain fatty acid transport
GO:0016021 IEA integral component of membrane
GO:0031957 IEA very long-chain fatty acid-CoA ligase activity
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046053 slc27a6 solute carrier family 27 (fatty acid transporter), member 6 protein_coding Danio_rerio
ENSMUSG00000024600 Slc27a6 solute carrier family 27 (fatty acid transporter), member 6 protein_coding Mus_musculus

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