C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dihydropyrimidinase-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113657 DPYSL3 9606 - 5:147390811-147510056 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343218 DPYSL3-003 147390812-147510056 protein_coding
  ENST00000398514 DPYSL3-001 147390811-147453959 protein_coding
  ENST00000504965 DPYSL3-002 147472632-147509535 processed_transcript
  ENST00000507309 DPYSL3-005 147395654-147453688 processed_transcript
  ENST00000508042 DPYSL3-006 147401540-147406198 retained_intron
  ENST00000512722 DPYSL3-004 147418483-147454266 protein_coding
  ENST00000519672 DPYSL3-007 147408728-147453665 processed_transcript
  ENST00000520473 DPYSL3-009 147393825-147401602 protein_coding
  ENST00000523458 DPYSL3-008 147395677-147405640 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000343218ENST00000398514
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000343218 5.373±0.00 8.892±0.00 4.635±0.25 14.216±2.50 11.761±6.36 3.831±1.69 35.056±0.00 10.136±3.78 0.922±0.00 24.263±9.31 3.548±1.71 2.519±0.00
ENST00000398514 N/A N/A 0.964±0.00 6.201±0.00 1.738±0.00 N/A N/A 2.406±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GA CIL_0001GA_0002 CGP 5:147234963-147510056
CIL_0001GB CIL_0001GB_0002 CGP 5:147390811-147782848

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 ISS extracellular space
GO:0005737 IEA cytoplasm
GO:0005829 ISS cytosol
GO:0006208 IEA pyrimidine nucleobase catabolic process
GO:0007399 IEA nervous system development
GO:0007411 TAS axon guidance
GO:0008152 IEA metabolic process
GO:0010976 ISS positive regulation of neuron projection development
GO:0010977 ISS negative regulation of neuron projection development
GO:0016787 IEA hydrolase activity
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0017124 ISS SH3 domain binding
GO:0030027 ISS lamellipodium
GO:0030336 ISS negative regulation of cell migration
GO:0030426 ISS growth cone
GO:0031941 ISS filamentous actin
GO:0035374 ISS chondroitin sulfate binding
GO:0044297 ISS cell body
GO:0048666 IEA neuron development
GO:0048678 ISS response to axon injury
GO:0051017 ISS actin filament bundle assembly
GO:0051219 IEA phosphoprotein binding
GO:0051260 ISS protein homooligomerization
GO:0051491 ISS positive regulation of filopodium assembly
GO:0051764 ISS actin crosslink formation
GO:0070382 ISS exocytic vesicle
GO:0071345 ISS cellular response to cytokine stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002587 dpysl3 dihydropyrimidinase-like 3 protein_coding Danio_rerio
ENSMUSG00000024501 Dpysl3 dihydropyrimidinase-like 3 protein_coding Mus_musculus

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