C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: stanniocalcin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113739 STC2 9606 - 5:173314713-173329503 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265087 STC2-001 173314713-173329503 protein_coding
  ENST00000518455 STC2-004 173323310-173326797 protein_coding
  ENST00000519511 STC2-003 173325834-173328447 retained_intron
  ENST00000520593 STC2-005 173318178-173324286 processed_transcript
  ENST00000520648 STC2-006 173322969-173328053 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartLungMuscleOvaryPlacentaTestisENST00000265087ENST00000519511
Transcript ID Adipose Bladder Brain Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000265087 0.367±0.00 0.139±0.00 0.058±0.00 0.062±0.00 0.023±0.00 0.640±0.00 0.118±0.11 0.358±0.15 N/A 0.240±0.09
ENST00000519511 N/A N/A N/A N/A N/A 94.162±0.00 N/A N/A 22.138±3.17 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000915 CIL_000915_0001 VISTA 5:172905793-173506594
CIL_0008HF CIL_0008HF_0001 VISTA 5:172963494-173565311
CIL_0002DP CIL_0002DP_0001 CGP 5:173314713-173616660

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005179 IEA hormone activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005615 IDA extracellular space
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006874 IEA cellular calcium ion homeostasis
GO:0006979 IEA response to oxidative stress
GO:0007566 IEA embryo implantation
GO:0010629 IDA negative regulation of gene expression
GO:0019899 IDA enzyme binding
GO:0020037 IDA heme binding
GO:0030968 IEA endoplasmic reticulum unfolded protein response
GO:0033280 IEA response to vitamin D
GO:0034976 IEA response to endoplasmic reticulum stress
GO:0040015 IEA negative regulation of multicellular organism growth
GO:0042803 IDA protein homodimerization activity
GO:0043434 IEA response to peptide hormone
GO:0046697 IEA decidualization
GO:0046885 IDA regulation of hormone biosynthetic process
GO:0048471 IDA perinuclear region of cytoplasm
GO:0055074 IEA calcium ion homeostasis
GO:0071456 IEA cellular response to hypoxia
GO:2001256 IEA regulation of store-operated calcium entry

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056680 stc2a stanniocalcin 2a protein_coding Danio_rerio
ENSDARG00000089134 stc2b stanniocalcin 2b protein_coding Danio_rerio
ENSMUSG00000020303 Stc2 stanniocalcin 2 protein_coding Mus_musculus

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