C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor-like 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113966 ARL6 9606 + 3:97764521-97801109 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335979 ARL6-201 97764521-97798535 protein_coding
  ENST00000394206 ARL6-202 97764521-97798535 protein_coding
  ENST00000462412 ARL6-004 97764533-97788003 protein_coding
  ENST00000463745 ARL6-001 97764528-97798529 protein_coding
  ENST00000476753 ARL6-006 97785017-97798535 protein_coding
  ENST00000493990 ARL6-002 97764521-97801109 nonsense_mediated_decay
  ENST00000494363 ARL6-005 97793372-97801107 processed_transcript
  ENST00000496713 ARL6-003 97764767-97791347 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000335979ENST00000462412ENST00000463745ENST00000476753ENST00000493990ENST00000494363ENST00000496713
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000335979 N/A 0.362±0.00 N/A N/A N/A N/A N/A N/A N/A 0.235±0.00 N/A N/A N/A
ENST00000462412 N/A N/A N/A N/A N/A N/A 0.277±0.00 0.797±0.00 N/A N/A 1.264±0.00 0.282±0.00 N/A
ENST00000463745 0.309±0.00 N/A 0.835±0.00 N/A 0.275±0.00 0.625±0.00 0.488±0.09 1.069±0.00 0.653±0.00 N/A 1.220±0.32 0.379±0.24 2.769±0.00
ENST00000476753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.511±0.00 0.195±0.00 N/A
ENST00000493990 N/A N/A N/A 1.412±0.00 0.579±0.00 N/A N/A N/A 0.926±0.00 0.298±0.00 0.125±0.00 0.200±0.00 3.493±0.00
ENST00000494363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A
ENST00000496713 N/A N/A N/A N/A 0.677±0.00 N/A N/A N/A N/A N/A N/A 0.271±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022M CIL_00022M_0002 CGP 3:96814581-97801109

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005543 ISS phospholipid binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 ISS:IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005879 ISS axonemal microtubule
GO:0005886 IEA plasma membrane
GO:0005929 IDA cilium
GO:0005930 ISS axoneme
GO:0006612 ISS protein targeting to membrane
GO:0006886 IEA intracellular protein transport
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007368 ISS determination of left/right symmetry
GO:0007420 IEA brain development
GO:0007601 IEA visual perception
GO:0008589 IEA regulation of smoothened signaling pathway
GO:0010842 IEA retina layer formation
GO:0016020 ISS membrane
GO:0016055 IMP Wnt signaling pathway
GO:0019001 IEA guanyl nucleotide binding
GO:0030117 ISS membrane coat
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0032402 ISS melanosome transport
GO:0034464 ISS BBSome
GO:0042384 ISS cilium assembly
GO:0045444 IEA fat cell differentiation
GO:0046872 IEA metal ion binding
GO:0046909 IEA intermembrane transport
GO:0051258 ISS protein polymerization
GO:0061512 IMP protein localization to cilium
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032056 arl6 ADP-ribosylation factor-like 6 protein_coding Danio_rerio
ENSMUSG00000022722 Arl6 ADP-ribosylation factor-like 6 protein_coding Mus_musculus

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