C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and BTB (POZ) domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114626 ABTB1 9606 + 3:127672935-127680920 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000232744 ABTB1-001 127672940-127680917 protein_coding
  ENST00000453791 ABTB1-004 127672958-127680920 protein_coding
  ENST00000464431 ABTB1-007 127675486-127680911 retained_intron
  ENST00000466612 ABTB1-011 127673014-127674601 processed_transcript
  ENST00000467179 ABTB1-013 127673306-127677193 processed_transcript
  ENST00000468137 ABTB1-006 127674110-127680913 protein_coding
  ENST00000474129 ABTB1-015 127676972-127680057 retained_intron
  ENST00000475042 ABTB1-005 127672958-127680920 nonsense_mediated_decay
  ENST00000475265 ABTB1-009 127672947-127677073 retained_intron
  ENST00000478298 ABTB1-014 127676536-127680057 retained_intron
  ENST00000479280 ABTB1-012 127673034-127676809 retained_intron
  ENST00000483857 ABTB1-008 127672935-127677026 nonsense_mediated_decay
  ENST00000491633 ABTB1-017 127676085-127680065 processed_transcript
  ENST00000493365 ABTB1-010 127672952-127676435 retained_intron
  ENST00000497162 ABTB1-016 127677177-127680063 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000232744ENST00000453791ENST00000464431ENST00000466612ENST00000467179ENST00000468137ENST00000474129ENST00000475042ENST00000475265ENST00000478298ENST00000483857ENST00000493365
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000232744 17.757±0.00 5.766±0.00 N/A 4.093±3.46 11.420±0.00 7.011±6.54 4.529±0.00 6.591±0.00 0.543±0.00 20.407±0.00 5.691±0.00 10.000±0.37 7.921±0.23 6.630±0.00
ENST00000453791 N/A N/A N/A 2.532±0.00 N/A N/A N/A N/A N/A 8.442±0.00 4.591±0.00 3.805±0.00 3.266±0.00 N/A
ENST00000464431 N/A N/A N/A N/A 1.014±0.00 0.892±0.37 0.694±0.00 N/A 0.311±0.05 N/A N/A 2.096±0.00 N/A N/A
ENST00000466612 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.951±0.00 N/A N/A N/A N/A
ENST00000467179 N/A N/A N/A N/A N/A 2.401±0.00 N/A 0.549±0.00 6.350±0.00 N/A 6.675±4.53 1.297±0.00 N/A N/A
ENST00000468137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.013±2.17 N/A 4.552±0.00
ENST00000474129 N/A N/A N/A N/A 2.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475042 8.193±0.00 9.348±0.00 N/A 6.914±0.00 4.970±0.00 9.187±0.00 3.915±0.00 N/A 3.096±0.00 N/A 5.810±0.00 6.834±0.00 9.006±3.14 7.205±0.00
ENST00000475265 N/A N/A 0.434±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478298 N/A N/A N/A N/A N/A N/A 1.151±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000483857 N/A N/A N/A N/A N/A N/A N/A 0.459±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493365 N/A N/A N/A 0.746±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0005515 IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006414 IEA translational elongation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063354 ABTB1 ankyrin repeat and BTB (POZ) domain containing 1 protein_coding Danio_rerio
ENSMUSG00000030083 Abtb1 ankyrin repeat and BTB (POZ) domain containing 1 protein_coding Mus_musculus

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