C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, mannose-binding 2-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114988 LMAN2L 9606 - 2:96705929-96740064 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264963 LMAN2L-001 96705929-96740063 protein_coding
  ENST00000377079 LMAN2L-007 96706340-96740064 protein_coding
  ENST00000434524 LMAN2L-006 96705975-96740041 nonsense_mediated_decay
  ENST00000434865 LMAN2L-005 96707044-96740063 nonsense_mediated_decay
  ENST00000440610 LMAN2L-003 96707117-96740064 nonsense_mediated_decay
  ENST00000446780 LMAN2L-004 96706877-96740064 nonsense_mediated_decay
  ENST00000449221 LMAN2L-002 96707180-96740064 nonsense_mediated_decay
  ENST00000474494 LMAN2L-009 96707678-96711914 retained_intron
  ENST00000480869 LMAN2L-008 96711726-96734687 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264963ENST00000434524ENST00000434865ENST00000446780ENST00000449221ENST00000480869
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264963 3.145±0.00 3.333±0.00 2.594±0.00 1.219±0.06 4.929±3.05 7.082±6.47 3.517±1.27 8.666±5.64 3.789±1.14 1.657±1.07 1.772±1.19 11.617±5.48 8.808±1.59 8.269±1.78
ENST00000434524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.174±0.00 N/A
ENST00000434865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.923±0.00
ENST00000446780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.819±0.00 N/A N/A N/A
ENST00000449221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.979±0.00 N/A N/A N/A
ENST00000480869 N/A N/A 4.011±0.00 3.584±0.00 2.697±0.00 1.777±0.00 3.877±0.00 1.660±0.00 5.960±0.00 2.847±0.00 5.040±0.00 13.262±1.89 11.609±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OA CIL_0003OA_0001 CGP 2:96705929-96811891

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005537 TAS mannose binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005794 IDA Golgi apparatus
GO:0006457 NAS protein folding
GO:0006888 TAS ER to Golgi vesicle-mediated transport
GO:0015031 IMP protein transport
GO:0016020 IEA membrane
GO:0016021 TAS integral component of membrane
GO:0030134 NAS ER to Golgi transport vesicle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018865 LMAN2L (1 of 2) lectin, mannose-binding 2-like protein_coding Danio_rerio
ENSDARG00000088663 lman2lb lectin, mannose-binding 2-like b protein_coding Danio_rerio
ENSMUSG00000001143 Lman2l lectin, mannose-binding 2-like protein_coding Mus_musculus

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