C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115286 NDUFS7 9606 + 19:1383527-1395589 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000233627 NDUFS7-002 1383631-1395589 protein_coding
  ENST00000313408 NDUFS7-020 1383904-1395581 protein_coding
  ENST00000414651 NDUFS7-016 1383922-1393532 protein_coding
  ENST00000436115 NDUFS7-007 1383904-1393710 retained_intron
  ENST00000534853 NDUFS7-013 1383907-1395576 nonsense_mediated_decay
  ENST00000535382 NDUFS7-010 1388000-1395584 retained_intron
  ENST00000538523 NDUFS7-015 1387739-1393661 retained_intron
  ENST00000538662 NDUFS7-006 1383900-1393877 retained_intron
  ENST00000538929 NDUFS7-014 1384051-1393326 processed_transcript
  ENST00000539480 NDUFS7-005 1383900-1395589 protein_coding
  ENST00000539882 NDUFS7-011 1388025-1388799 retained_intron
  ENST00000540530 NDUFS7-009 1387804-1395589 retained_intron
  ENST00000543289 NDUFS7-004 1383890-1395584 retained_intron
  ENST00000545446 NDUFS7-003 1383875-1395584 retained_intron
  ENST00000546172 NDUFS7-018 1383918-1395584 nonsense_mediated_decay
  ENST00000546283 NDUFS7-001 1383527-1393545 protein_coding
  ENST00000591358 NDUFS7-012 1391842-1395584 retained_intron
  ENST00000618074 NDUFS7-201 1383884-1395588 protein_coding
  ENST00000620479 NDUFS7-202 1383918-1395588 protein_coding
  ENST00000622587 NDUFS7-017 1386628-1395584 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000233627ENST00000313408ENST00000436115ENST00000534853ENST00000535382ENST00000538662ENST00000538929ENST00000539480ENST00000543289ENST00000545446ENST00000591358ENST00000618074ENST00000620479ENST00000622587
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000233627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.250±0.00
ENST00000313408 N/A N/A N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A N/A 1.970±0.00 N/A N/A
ENST00000436115 N/A N/A N/A N/A 0.552±0.00 N/A N/A 0.392±0.00 0.403±0.00 N/A N/A 0.156±0.00 N/A N/A
ENST00000534853 N/A N/A 2.624±0.00 6.272±0.00 N/A 16.801±0.00 19.569±16.46 11.326±7.54 15.034±14.00 13.115±11.04 56.037±0.00 7.790±6.44 47.490±1.87 N/A
ENST00000535382 N/A N/A N/A N/A 0.406±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538662 N/A N/A N/A N/A N/A N/A N/A N/A 0.516±0.00 N/A N/A N/A N/A N/A
ENST00000538929 46.949±0.00 71.702±0.00 1.480±0.00 43.103±38.53 44.536±42.05 16.273±14.76 4.720±0.00 20.926±18.83 14.041±12.89 19.683±0.00 62.524±28.05 22.094±21.08 40.125±13.78 47.748±0.00
ENST00000539480 N/A N/A N/A N/A N/A 4.465±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543289 N/A N/A N/A N/A 0.311±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545446 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.244±0.00 N/A N/A N/A N/A
ENST00000591358 N/A N/A N/A N/A N/A 0.310±0.00 N/A N/A N/A N/A N/A 0.761±0.00 N/A N/A
ENST00000618074 N/A N/A 1.227±0.00 4.140±0.00 N/A N/A N/A 20.426±0.00 N/A N/A 13.626±0.00 N/A 10.390±0.00 N/A
ENST00000620479 12.296±0.00 N/A N/A N/A 23.432±0.00 N/A N/A N/A N/A N/A N/A 34.302±0.00 N/A N/A
ENST00000622587 N/A N/A N/A N/A N/A 2.371±0.00 N/A N/A N/A N/A 7.923±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QX CIL_0000QX_0001 CGP 19:1354711-1395589
CIL_0005ZH CIL_0005ZH_0002 CGP 19:1383527-1401570

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002020 IEA protease binding
GO:0003954 IMP NADH dehydrogenase activity
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005747 IMP mitochondrial respiratory chain complex I
GO:0006120 NAS mitochondrial electron transport, NADH to ubiquinone
GO:0008137 NAS:IEA NADH dehydrogenase (ubiquinone) activity
GO:0016655 NAS oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
GO:0022904 TAS respiratory electron transport chain
GO:0032981 IMP mitochondrial respiratory chain complex I assembly
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0048038 IEA quinone binding
GO:0051536 IEA iron-sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0055114 IEA oxidation-reduction process
GO:0097060 IEA synaptic membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074552 ndufs7 NADH dehydrogenase (ubiquinone) Fe-S protein 7, (NADH-coenzyme Q reductase) protein_coding Danio_rerio
ENSMUSG00000020153 Ndufs7 NADH dehydrogenase (ubiquinone) Fe-S protein 7 protein_coding Mus_musculus

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