C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CCAAT/enhancer binding protein (C/EBP), zeta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115816 CEBPZ 9606 - 2:37201612-37231713 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000234170 CEBPZ-001 37201612-37231713 protein_coding
  ENST00000446769 CEBPZ-002 37228608-37231369 protein_coding
  ENST00000489306 CEBPZ-003 37201784-37212108 retained_intron
  ENST00000619061 CEBPZ-201 37201723-37231579 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000234170ENST00000619061
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000234170 N/A 1.854±0.00 5.092±0.00 4.500±0.00 4.997±1.94 7.189±0.00 3.589±0.00 3.664±0.14 6.326±0.00 8.576±0.00 10.779±5.07 2.534±0.46 15.441±0.00
ENST00000619061 10.000±0.00 N/A N/A N/A N/A 2.011±0.00 N/A N/A 7.267±1.84 3.626±1.68 11.399±6.65 7.286±4.89 26.860±6.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085G CIL_00085G_0001 VISTA 2:37116727-37718317
CIL_0002IJ CIL_0002IJ_0001 CGP 2:37167820-37216193
CIL_0002II CIL_0002II_0001 CGP 2:37196488-37231713
CIL_0002IL CIL_0002IL_0001 CGP 2:37201612-37253403

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 TAS DNA binding
GO:0005488 IEA binding
GO:0005634 IEA nucleus
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0044822 IDA poly(A) RNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045857 cebpz CCAAT/enhancer binding protein (C/EBP), zeta protein_coding Danio_rerio
ENSDARG00000094486 si:ch1073-412h12.3 CCAAT/enhancer binding protein (C/EBP), zeta protein_coding Danio_rerio
ENSMUSG00000024081 Cebpz CCAAT/enhancer binding protein zeta protein_coding Mus_musculus

Loading