C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trafficking protein, kinesin binding 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115993 TRAK2 9606 - 2:201377207-201451611 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332624 TRAK2-001 201377207-201451579 protein_coding
  ENST00000430254 TRAK2-002 201395128-201451500 protein_coding
  ENST00000440597 TRAK2-004 201420417-201433554 protein_coding
  ENST00000451703 TRAK2-005 201419197-201451453 processed_transcript
  ENST00000486291 TRAK2-003 201397606-201399510 retained_intron
  ENST00000620184 TRAK2-201 201379852-201451611 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332624ENST00000430254ENST00000620184
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332624 15.782±0.00 10.055±0.00 N/A 7.956±4.41 7.072±3.45 9.338±3.79 16.694±10.63 7.709±7.13 3.883±1.39 6.953±0.00 2.237±1.33 3.849±0.85 6.090±1.08 6.499±4.26
ENST00000430254 N/A N/A N/A N/A N/A N/A N/A 2.786±0.00 N/A N/A N/A N/A N/A N/A
ENST00000620184 N/A N/A 3.788±0.00 5.202±0.00 4.074±0.00 5.622±0.00 14.341±3.80 N/A 5.768±0.00 9.011±0.00 1.887±0.00 3.185±0.00 N/A 2.867±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0001 VISTA 2:201132231-201734391
CIL_0000JJ CIL_0000JJ_0002 CGP 2:201377207-201480846

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 ISS receptor binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005768 IEA endosome
GO:0005886 ISS plasma membrane
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006493 IEA protein O-linked glycosylation
GO:0006605 IEA protein targeting
GO:0019899 IEA enzyme binding
GO:0050811 NAS GABA receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078872 trak2 trafficking protein, kinesin binding 2 protein_coding Danio_rerio
ENSMUSG00000026028 Trak2 trafficking protein, kinesin binding 2 protein_coding Mus_musculus

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