C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 2 open reading frame 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115998 C2orf42 9606 - 2:70149880-70248615 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264434 C2orf42-001 70149880-70191071 protein_coding
  ENST00000417203 C2orf42-007 70181919-70191002 protein_coding
  ENST00000417865 C2orf42-006 70181509-70191004 protein_coding
  ENST00000419381 C2orf42-014 70181603-70182935 protein_coding
  ENST00000420306 C2orf42-002 70149898-70181995 protein_coding
  ENST00000425268 C2orf42-011 70181809-70190900 protein_coding
  ENST00000428010 C2orf42-005 70181806-70191004 protein_coding
  ENST00000428751 C2orf42-008 70181892-70190977 protein_coding
  ENST00000447804 C2orf42-004 70181480-70191017 protein_coding
  ENST00000457952 C2orf42-012 70181650-70190699 protein_coding
  ENST00000464505 C2orf42-013 70182841-70190699 processed_transcript
  ENST00000470096 C2orf42-015 70181630-70248615 processed_transcript
  ENST00000487560 C2orf42-009 70182789-70190953 processed_transcript
  ENST00000495353 C2orf42-010 70182397-70190907 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverMusclePlacentaTestisENST00000420306ENST00000428010ENST00000447804
Transcript ID Adrenal Brain Breast Colon Kidney Liver Muscle Placenta Testis
ENST00000420306 5.903±0.00 2.974±0.00 2.782±0.00 3.191±0.00 4.418±1.37 2.529±0.00 2.617±0.00 3.702±0.42 30.583±2.32
ENST00000428010 N/A N/A N/A N/A N/A N/A N/A N/A 48.931±0.00
ENST00000447804 N/A N/A N/A N/A N/A N/A N/A N/A 48.389±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0001 VISTA 2:69833131-70434482

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059636 C5H2orf42 chromosome 2 open reading frame 42 protein_coding Danio_rerio
ENSMUSG00000046679 C87436 expressed sequence C87436 protein_coding Mus_musculus

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