C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat containing, antisense to TP73
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116213 WRAP73 9606 - 1:3630767-3652761 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000270708 WRAP73-001 3630767-3650073 protein_coding
  ENST00000378322 WRAP73-002 3630767-3650058 protein_coding
  ENST00000419924 WRAP73-006 3635272-3650063 protein_coding
  ENST00000424367 WRAP73-005 3632213-3650026 protein_coding
  ENST00000465916 WRAP73-004 3635014-3652761 protein_coding
  ENST00000469643 WRAP73-009 3633310-3635450 retained_intron
  ENST00000471223 WRAP73-003 3631886-3639625 retained_intron
  ENST00000479331 WRAP73-010 3647246-3650061 retained_intron
  ENST00000494884 WRAP73-008 3634916-3635433 retained_intron
  ENST00000497940 WRAP73-007 3632766-3637057 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000270708ENST00000378322ENST00000419924ENST00000424367ENST00000465916ENST00000469643ENST00000471223ENST00000479331ENST00000497940
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000270708 0.410±0.00 2.926±0.00 0.341±0.00 1.123±0.00 1.648±0.08 1.774±0.80 1.020±0.74 3.637±0.00 1.584±0.00 1.203±0.13 3.639±1.06 5.836±3.17 5.954±2.06 7.902±0.04
ENST00000378322 0.252±0.00 N/A N/A N/A N/A 0.465±0.00 1.722±0.00 0.801±0.67 0.521±0.00 1.229±0.00 N/A 2.458±0.55 1.909±0.69 1.811±0.00
ENST00000419924 N/A N/A N/A N/A 2.468±0.00 1.311±0.00 1.352±0.00 N/A N/A 1.317±0.00 N/A N/A N/A N/A
ENST00000424367 N/A N/A N/A N/A N/A 1.113±0.00 N/A 1.657±0.00 0.826±0.00 N/A N/A 5.924±0.00 4.074±0.00 6.300±0.00
ENST00000465916 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.098±0.00 N/A N/A N/A N/A
ENST00000469643 N/A N/A N/A N/A 1.791±0.00 N/A N/A N/A N/A N/A 6.377±0.00 3.137±0.00 N/A N/A
ENST00000471223 N/A N/A 0.038±0.00 0.282±0.00 0.136±0.02 0.108±0.04 0.022±0.00 0.138±0.07 0.035±0.00 0.150±0.02 N/A 0.515±0.18 N/A N/A
ENST00000479331 N/A N/A 0.986±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497940 N/A N/A 0.330±0.00 N/A N/A N/A N/A N/A 1.353±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099V CIL_00099V_0001 VISTA 1:3045529-3649801
CIL_0002BY CIL_0002BY_0002 CGP 1:3625002-3652761
CIL_0006BL CIL_0006BL_0002 CGP 1:3630767-3736201

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009557 wrap73 WD repeat containing, antisense to TP73 protein_coding Danio_rerio
ENSMUSG00000029029 Wrap73 WD repeat containing, antisense to Trp73 protein_coding Mus_musculus

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