C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116251 RPL22 9606 - 1:6181269-6209389 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000234875 RPL22-001 6185020-6199612 protein_coding
  ENST00000462296 RPL22-008 6192927-6203494 protein_coding
  ENST00000465335 RPL22-006 6192930-6209389 protein_coding
  ENST00000465387 RPL22-005 6186723-6199553 protein_coding
  ENST00000471204 RPL22-007 6186692-6209244 protein_coding
  ENST00000480661 RPL22-003 6186575-6199563 retained_intron
  ENST00000484532 RPL22-004 6181269-6197757 protein_coding
  ENST00000497965 RPL22-002 6186615-6200842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000234875ENST00000465387ENST00000471204ENST00000480661ENST00000497965
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000234875 101.213±0.00 105.689±0.00 18.942±0.00 43.981±14.20 62.732±27.53 89.215±58.28 23.369±13.23 49.495±22.45 33.645±9.16 52.535±26.89 40.984±18.18 164.048±63.39 75.703±6.66 57.574±27.20
ENST00000465387 N/A N/A N/A N/A N/A N/A N/A N/A 42.908±0.00 115.627±0.00 N/A 701.084±0.00 238.855±6.91 N/A
ENST00000471204 N/A N/A 19.150±0.00 43.443±0.00 58.868±0.00 49.246±0.00 29.064±0.00 52.219±0.00 83.647±0.00 43.129±0.00 58.314±0.00 118.112±0.00 119.488±0.00 N/A
ENST00000480661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.627±0.00
ENST00000497965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 228.756±0.00 111.950±0.00 33.980±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019L CIL_00019L_0002 CGP 1:6181269-6221299

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0005925 IDA focal adhesion
GO:0006412 IEA:NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0008201 IEA heparin binding
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0030529 IDA ribonucleoprotein complex
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0046632 IEA alpha-beta T cell differentiation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070437 rpl22 ribosomal protein L22 protein_coding Danio_rerio
ENSMUSG00000028936 Rpl22 ribosomal protein L22 protein_coding Mus_musculus

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